Sclerotinia sclerotiorum: SS1G_05482
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Entry
SS1G_05482 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SS1G_05482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_05482
03012 Translation factors [BR:
ssl03012
]
SS1G_05482
Enzymes [BR:
ssl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SS1G_05482
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
SS1G_05482
Translation factors [BR:
ssl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
SS1G_05482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
nSTAND3
AAA_19
NACHT
T2SSE
Motif
Other DBs
NCBI-GeneID:
5489851
NCBI-ProteinID:
XP_001594054
UniProt:
A7EJI9
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MPLALQGIPQPPDTSNCLFQIPPGSSLPSELEVPLPPTAVFLNDTIDWEAVDKILEKHPF
LAKAINLGTSRHRDAFFLASLWDISHLVQQRAPCTFEYETKYIKATNGDKDLIECNLTCN
LPGVPPLKTSATSTQNARATNAAILQLLLLLEEKQQLDALLSFVAPKCISKDVKKELSNT
NVQPTDTAPVMASSEISNLIARLAARKNLATEPTPVEEPQEEIPHSSHVTREVFNYAARY
LHVPRYTVNVQKRSKRYISNNFTMSGKVRSPKKFFTVEISLPEHGIHATAIGDSLGLVEA
QACVNFKKQAEKYHIANAVPSDPFEGPIFLSTGNAKNFMDFYNDHNAKIAINVIREGGLW
TGQAFAKESKTSAHELIGQVIKRNSSHGLETLTLLVAAVTIVKQRPELLLRYMENLDSRT
GKYVGKAQPMELEVQQSSQHLMQRTVETTSKLGSSTPLTDEPVGYDVSFFPRPLENPLLY
FGIRTERRSRDLLMWYRQRLAGKRRGTLLPLNKHASEVLSHVESNQYSIIVGKTGSGKTT
QLPQIILDDCIRKWKGGTCRIICTQPRRIAATSVAQRVAEERGQELCDQVGYKIGSNAKL
PNLRGSITYCTTGIVLQQLIHSPDDLLDNISHLIIDEVHERDISIDFLLTMLRKLIKERI
ESGKRNPKVCFMSATVDAEMFQEYFASTASTVGDVSCPILHVEGRAFPVERHYLENIMDN
FKETYPRNHAIWGLLDSSPTQRYLKSEENDKKSNPPVGVEREKVDSVIRWDSHDDDPDSL
QNQMKMDLVEGLIPVDLAAVVIAHIAQTTEDGAILLFLPGLRSINAVETILRTQKILDVD
FNNEDKFKIFKLHSSTSDENPEVFKPVPQGCRKIILATNVAETSITVNDVQYVVDTGKHK
EDNFHQKLRIWSLPCKWVSKSSVKQRSGRAGRVKNGSYYALFS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgccccttgctcttcaagggatacctcagcctcccgatacgagcaattgcttgttccag
attccccctggttccagtctaccaagcgagcttgaagtgcctcttccaccgacggccgtg
tttttgaatgatacaattgactgggaagcggtagataaaattttggagaaacacccgttt
ttagccaaggctatcaacttaggcacatccagacacagggacgcctttttcttggcttct
ctgtgggatatctcacatctcgtgcaacaaagagcgccgtgtacttttgagtacgagact
aagtatattaaggcaaccaacggcgacaaagatctcattgaatgtaatttgacatgcaac
ctcccaggtgtacctccgctgaagaccagtgcgacttccacccaaaatgctcgagccaca
aatgcggcaattttgcaactacttctcctgctcgaagagaagcaacaattggatgcctta
ttatcctttgtagcaccaaaatgtatttcaaaagacgtaaagaaagagttgagcaatact
aatgttcagcccacagatacggcaccagtaatggcatcgtcggaaatatcaaacctgata
gcacgattagcagcacgaaaaaacctagcaacagaaccgacaccagtagaggagccacaa
gaagaaattccacatagtagccatgtcacccgcgaggtttttaactatgcagcaagatac
ctacatgttcctagatacacagttaatgtccaaaagcgttccaaaagatatatttcgaac
aatttcaccatgtcaggaaaggttagatctccaaagaaattttttaccgttgagatctcc
ttgcctgaacatggcatccatgcaaccgcaattggagactctctcggcctcgtggaggcc
caggcttgtgtaaatttcaaaaaacaagctgaaaaatatcacattgcaaatgccgtacct
tctgatccattcgaaggaccaatctttctaagcactggaaatgcgaaaaacttcatggat
ttctacaatgatcacaatgctaaaatagccattaacgtaatacgcgagggcggtctttgg
acaggtcaagcctttgctaaagagtctaaaactagtgctcatgaactaattggccaggtc
attaaaagaaacagttctcatggtcttgaaacgctaactctactagtggctgcagtcaca
atagtcaagcaacgacctgagctactcttgcgttatatggagaatctagactcaagaact
ggaaagtacgtcggcaaagctcagcctatggagcttgaagtacagcagagtagtcagcat
ctaatgcagcgtacggtagaaactacttcaaagttaggttcatctacaccacttacggat
gaacctgtgggttatgatgtctctttttttccacgtcccctcgaaaatccccttttatat
tttggcataaggactgagcgacgttcccgtgatttgcttatgtggtaccgccaaaggctg
gctggaaaacgccgcgggactttacttcctttaaacaagcatgcttctgaggtactgagc
cacgttgaaagcaatcaatactcaattatcgtcgggaaaaccgggagtggaaagacgact
caactgcctcagatcattttggatgattgtattcgcaaatggaaaggtggaacatgcagg
atcatctgcacacagccgcgaagaatagcggcgacttcagtagctcaacgtgtcgccgaa
gaacgcggtcaagagttgtgcgatcaagtgggatacaaaataggttccaatgccaagctt
cccaatcttagaggaagcatcacatattgtaccacaggaatcgtcttacaacaattaatt
cactctcccgatgatctacttgataacatatcgcatcttattattgatgaggtacacgag
agagatataagtattgattttcttttgactatgttaagaaaacttataaaagagagaata
gaatccgggaaaaggaatcctaaagtgtgcttcatgagcgccaccgtggacgctgaaatg
tttcaagagtacttcgcttcaacggcatcgaccgtaggagatgtttcctgcccaattctt
catgttgagggtcgagcttttccagtcgaaaggcattatcttgagaatatcatggacaat
ttcaaagaaacatatccaagaaaccatgccatttggggccttcttgattctagtccgact
caacgttatctgaagagtgaagaaaatgataagaaatccaatccgccggttggtgttgag
agagagaaggttgactctgtgattagatgggacagccacgacgatgatcccgatagtcta
caaaatcagatgaaaatggatcttgtggagggcctaatacctgttgatttagctgccgtt
gtgattgcacacatagcgcaaaccacagaggatggtgcaatattacttttcttgccaggc
ttacggagtatcaatgcagttgaaacgatcctcaggacgcaaaaaattcttgatgtagac
ttcaacaacgaggataagttcaagattttcaaattacactcttctacttcagatgaaaat
ccagaagtcttcaagccagttccccaaggttgtcgaaagatcattctagccacgaacgtg
gctgagacttcgatcaccgtcaacgatgtccaatatgtcgtggatactgggaagcacaag
gaagataatttccaccagaagttacgaatttggtcattgccttgtaaatgggttagcaag
tcaagcgtgaaacagagatctggtcgagcgggccgtgttaagaacggtagttattacgct
ctcttttcgtga
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