Sclerotinia sclerotiorum: SS1G_05520
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Entry
SS1G_05520 CDS
T01071
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_05520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_05520
03016 Transfer RNA biogenesis [BR:
ssl03016
]
SS1G_05520
03012 Translation factors [BR:
ssl03012
]
SS1G_05520
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_05520
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssl04147
]
SS1G_05520
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
SS1G_05520
Transfer RNA biogenesis [BR:
ssl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
SS1G_05520
Translation factors [BR:
ssl03012
]
Eukaryotic type
Elongation factors
SS1G_05520
Membrane trafficking [BR:
ssl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
SS1G_05520
Exosome [BR:
ssl04147
]
Exosomal proteins
Proteins found in most exosomes
SS1G_05520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PDZ
Motif
Other DBs
NCBI-GeneID:
5490092
NCBI-ProteinID:
XP_001594091
UniProt:
A7EJM6
A0A1D9QAP7
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MGKEKTHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVL
DKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAVLIIAAGT
GEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTTKWSEERYQEIIKETSNFIKKVG
YNPKTVPFVPISGFNGDNMIDNSTNCPWYKGWEKEAKGGAKSTGKTLLEAIDAIDPPSRP
TDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKAGMVVTFAPAGVTTEVKSVEMHHEQLVE
GVPGDNVGFNVKNVSVKEIRRGNVAGDSKQDPPKGAESFNAQVIVLNHPGQVGAGYAPVL
DCHTAHIACKFSELLQKIDRRTGKSIEDSPKFIKSGDAAIVKMVPSKPMCVEAFTEYPPL
GRFAVRDMRQTVAVGVIKSVEKQEKAGKVTKAAVKAGAKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagacacatatcaacgtcgttgtcatcggacacgtcgactccggaaag
tccaccaccaccggtcacttgatctacaagtgcggaggaattgacaagcgtactatcgag
aagttcgagaaggaagccgccgaactcggtaagggttctttcaagtacgcatgggttttg
gacaagctcaaggctgagcgtgaacgtggtatcaccatcgacattgctctctggaagttc
gagacaccaaagtactatgtcaccgtcattgatgcccctggtcatcgtgatttcatcaag
aacatgatcactggtacttcccaagctgattgtgccgttctcatcattgccgccggtact
ggtgagttcgaggctggtatctccaaggatggccaaactcgtgagcacgctcttcttgcc
tacacccttggtgttaagcaactcatcgttgccatcaacaagatggacaccaccaagtgg
tctgaggaacgttaccaagaaattatcaaggagacctccaacttcatcaagaaggtcgga
tacaacccaaagaccgttcctttcgttcctatctccggtttcaacggtgataacatgatc
gacaactccaccaactgcccatggtacaagggttgggagaaggaggccaagggaggagcc
aagtccaccggaaagacccttctcgaggctattgatgccatcgacccaccttcccgccca
actgacaagcccctccgtcttcccctccaagatgtttacaagattggtggtattggcacg
gtgccagtcggtcgtgtcgagaccggtatcatcaaggccggtatggtcgtcaccttcgcc
ccagctggtgtcaccactgaagtcaagtccgttgagatgcaccacgaacaactcgttgag
ggtgttccaggtgacaacgtcggattcaacgtcaagaacgtttccgtcaaggaaatccgt
cgtggtaacgttgctggtgactccaagcaagatccacctaagggtgctgagtctttcaac
gctcaagtcatcgtccttaaccaccctggtcaagtcggtgctggttacgctccagttttg
gattgccacactgctcacattgcttgcaagttctctgagctcctccaaaagattgatcgt
cgtaccggtaaatccattgaagactctccaaaattcatcaagtctggtgatgctgctatc
gtcaagatggttccatccaagcctatgtgtgttgaggccttcactgagtacccacctctc
ggacgtttcgctgtccgtgatatgagacaaaccgtcgctgtcggtgtcatcaagtccgtc
gagaagcaagagaaggccggtaaggtcaccaaggccgccgtcaaggctggtgccaagaaa
taa
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