Sclerotinia sclerotiorum: SS1G_05650
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Entry
SS1G_05650 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SS1G_05650
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssl01002
]
SS1G_05650
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssl03021
]
SS1G_05650
03036 Chromosome and associated proteins [BR:
ssl03036
]
SS1G_05650
Peptidases and inhibitors [BR:
ssl01002
]
Metallo peptidases
Family M1
SS1G_05650
Transcription machinery [BR:
ssl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SS1G_05650
Coactivators
SAGA/TFTC/STAGA complex
SS1G_05650
Chromosome and associated proteins [BR:
ssl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
SS1G_05650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
Peptidase_M1_N
HEAT_2
DUF7928
Motif
Other DBs
NCBI-GeneID:
5489336
NCBI-ProteinID:
XP_001592729
UniProt:
A7EK04
LinkDB
All DBs
Position
Unknown
AA seq
1524 aa
AA seq
DB search
MPALLLNHDDRGVAPVAMEEPADYGFIVVHQKVELEIDFSTKTLRGKTEIQILPQMKELQ
TIHIHARQCSIPQKQVLVNGRIASFSYEDPHKKLEVPDYFSWDTESHKMQSDRIKFMASD
NKLAGTIEIDLPDSVKIEEVDPFSDKAATPVTQRAGGATVIRNSSVALEGGPVSVPAFIA
KTAAEQASRFQPLTITIPFVTTRIRDGLQFVGVEEGDVRFPHVYTKHSMERGVACCIFPC
VDDSAMRCSWDISIKCSRTLGDALKRRQNNHSHKYGHTNGTSEKTDIEEAFLSDEEKLLE
MAVICSGEQVDEVIDLDDSSKKIVSFQCTSDISATHIGFAIGPFEQVDLSEYREGEDEER
LGQGQSTAIYGYCLPGRTEELRNTCAPLAHAIDHFVLTLGSFPFSESKFVFVDDQVNDTE
HTASLSLCSSRLLFPEDIIDPEMDTVRKLVHAIASQYVGVSIVPDRRSDRWLIVGISHFM
TNTFMKNLCGNNEFMFRQKLNTDRLVKLDIDRPSLHALGEIVDVCDTFREFMELKAPLVL
FILDKRIAKAQGGTGISRVISKMIVNANASGGADSTISTEGFRKSCEKITKYRDTDSFFT
QWVLGAGCPHFTITQKFNKKRLCVEMTITQTQANSETELKLHKDGFYRSFKESTAGVIAP
KAQNTFTGPLTIRIHEADGTPYEHIVMIREKTSRIEIPYNTKYKRLKRNRRMKERANAGI
AMDINAENHDDALIYCLGDVLQSPQDIQEWGLRDWDPATEAKMEAESYEWIRVDADFEWI
CDKKFTGMEAYMYVSQLQQDRDISAQYESMAYLDNAPPHPLVATFLIRTLMDRRYFYGIR
TMAAKSLAKHAVEKDVKWIGLTHLEKAFQEFFCYPGTKMPRSNDFSDKQAYWIECAIPEA
MSRVRSLYDSLCPKRARQFILDQLRFNDNGNNDYSDNFKVANLLKSLADSLIPGEKGVNN
DALQLDEAEEIEEPQQFKNIVLEELDRYSRMDEWIDSYQNIYTITVIECKLKLMNAGVIP
VDALDFAQYLHDGSSPNVRIKASWALADLGFLKNTAVACLLVTAMSTDPSPWVRGELTKV
FYYGLGVLGLGEYKTKRVAAPVAKDGLIIEEASTSARQEQAERSNIIGALASLKLEVGGN
TDLKNALWKAVLSPVITVAEQMDFLDLCTMFCYPKESLNLKLKYPRYWRVEHRGKGRMVF
KQTKKVRTTIVERIVPSKIKALAAPQPPVPSPTVVAPSVVAPSLGNSSALKLGSSPAPKP
ANPPALKFGSSSSGLKIGGQSTGVPKHPGFSGSSAATPKHPSSSGPFAGPPKTSSSLGTT
KHSSSVHSSAGTSKPPGLVKLSGSSGDMKPPKRPLPADIAESSNSLHKDKKQFESSSSHK
DRKPALIVKLKIPASKLKRIVSSPRNPKPKAPSSSPSMSNPRRPSPKPSPKPSSKPSPAL
TQPIRASPALSFSSSSSGHTSSNVKKPSSSTHVAAPIRKPLPEGRKPLPDSAQHLPSAPP
TPGDVPKKPTIKLNFKPKPKPSFS
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgttattactgaatcacgacgaccgcggagttgcgcctgttgcgatggaagaa
cctgcggactatggcttcatagtagtacatcaaaaggttgaacttgagattgatttctcg
acaaaaaccttgcgtggcaaaaccgaaatccaaattctcccacagatgaaggaactgcag
acaatacatattcatgctcgacagtgctctattccacaaaaacaggttctggtaaacggt
cgaatcgcgtctttctcctacgaagacccccacaagaaactggaagttcccgactacttt
tcatgggatacagaatcgcataagatgcaaagcgacagaataaagtttatggcttcggac
aacaaactagcaggtacaatagagattgatttgccagatagtgtgaagattgaggaagtt
gatccattctcggataaggcagcaacaccagtcacgcaacgtgctggtggtgcgactgta
atccgcaactcttctgtcgctcttgaaggaggtccggtatctgttcccgcttttattgca
aaaacagctgcagagcaagcttctagatttcaacccttgactattactatccctttcgtt
accacacgaattcgagatggtttacaattcgttggggttgaggaaggagatgtgaggttc
cctcatgtctataccaaacattctatggagcgaggcgtcgcatgctgtatcttcccttgt
gtcgacgattcagcgatgagatgttcgtgggatatttccattaaatgttcgagaactctt
ggagacgcactcaagcgtcggcaaaataaccacagccacaagtatgggcataccaatggg
acttctgagaagacggacattgaagaagctttcctcagcgacgaggagaagctgcttgag
atggcagtaatttgctctggtgaacaagttgatgaagtgattgatttggatgatagttct
aagaagatcgtatcatttcaatgcacttctgatatatctgcaacacacataggtttcgcc
attggtccgtttgagcaggtcgatttgtcagaataccgagagggcgaagatgaagaacga
cttggacaaggacagtcaactgcaatatatggatactgcctccctggaagaacggaagag
ttgaggaatacttgcgcaccattggctcacgccattgatcactttgtcctcaccttgggc
agtttcccattttcagagtcaaaatttgtttttgttgatgaccaggtaaacgacacggag
cacaccgcatcgctatccctttgcagtagtcgacttttatttccggaagacatcatcgat
ccagagatggataccgtcagaaaacttgttcatgctatagctagccaatatgttggtgtt
agcattgtgccagaccgacgttctgataggtggctcattgttggtatctcccatttcatg
acaaacacattcatgaagaacctttgtgggaataacgaatttatgttccgtcagaaactg
aatacggaccggcttgttaagttggatattgacagaccatccctacatgcccttggtgag
attgtggatgtgtgtgacacctttcgagaattcatggagttgaaggcaccgctcgttctg
ttcattctggacaagcgcattgcgaaagcacaaggaggtactggtatctcaagagtcatc
tctaagatgattgttaacgcaaatgcttctggaggcgcggactctacaatttcgacggaa
gggttccgtaaaagctgtgagaaaatcaccaagtacagagatactgattccttcttcact
cagtgggttcttggcgcaggatgcccgcactttactatcacacaaaagttcaacaagaag
agactgtgtgttgaaatgactattacacaaacccaggcgaactctgagacagaacttaag
ttgcacaaggatggcttctacagatctttcaaggaatcgacagctggagtaattgcacca
aaggcacagaacacatttactggaccgttgaccattcgcattcacgaggctgatggtact
ccctatgaacacatagttatgatcagagagaagacatcaagaatcgaaattccgtacaac
accaaatacaagcggcttaagcgcaataggcgtatgaaggaacgtgcaaatgcaggcatt
gccatggatatcaatgccgaaaaccatgacgatgctcttatttactgcttaggggacgta
ctccagtcaccgcaagatatccaagagtggggcttacgggactgggacccagctaccgaa
gccaagatggaagctgagtcgtatgaatggattcgtgttgatgctgactttgaatggata
tgcgataagaaattcactggtatggaggcgtacatgtatgtttctcaacttcagcaagat
cgcgatatctcggctcaatatgaatcgatggcgtacctggataatgctcctccgcatccg
ctcgttgccacattcttgattagaactttgatggaccggcgctatttctatggcattagg
acaatggctgcgaagtcccttgctaaacatgctgtagagaaagatgtaaagtggataggt
cttactcacctcgaaaaggctttccaagagttcttttgctaccctggtacaaagatgcca
aggtctaatgatttctctgataaacaagcttactggattgaatgcgcaattcccgaggct
atgtcaagggtcagaagcttatacgattctctctgccctaaaagagcgcgacagttcata
cttgaccagcttcgcttcaacgacaatggaaacaatgactattcggacaacttcaaggtt
gcaaaccttttgaagtcactagcagactctttgattcctggtgaaaagggagtcaataac
gatgcacttcaacttgacgaggccgaagaaattgaagagcctcagcagttcaagaatatc
gttttggaggagcttgacagatacagtaggatggatgagtggatagattcttatcagaat
atctataccatcacagtcatagagtgtaagctgaagttgatgaatgcaggtgtcatacca
gtggatgcacttgactttgctcaataccttcacgatggaagttctcctaatgtacgaatc
aaagcgtcttgggcacttgctgaccttggattcttgaaaaatactgctgtggcatgtctc
ctcgtgactgctatgagtacagatccgtcgccatgggttcgaggtgaactgacaaaagtg
ttttattatggattgggagtcctgggactgggtgaatacaaaactaaacgagttgccgct
cctgtggccaaggatggcttaattatcgaagaggcttccacgagtgcacggcaggagcaa
gcagagcggagtaacataataggtgctcttgcttcgctgaagttggaagtcggcggaaac
actgatttaaaaaatgccttgtggaaagctgtcctgtctcctgtgattactgtggcagaa
caaatggatttccttgacctctgcaccatgttttgttatcccaaagagtccttgaatttg
aagctaaagtatcctcgttattggagagttgaacatcgtgggaagggtcgaatggtcttt
aaacaaaccaagaaagttcgcacaactatcgtggaaagaattgttccaagcaagatcaaa
gcccttgctgcccctcagccacctgtaccgtcacccaccgtcgtcgcaccctccgtcgtc
gcaccctctctaggcaattcatctgctctaaagctcggcagttcgcctgctccaaagcca
gctaatccacctgctcttaaatttggcagctcatcttctgggctcaagattggcggccaa
tctactggagttcctaagcatccaggattttcaggttcatctgctgcaacgcctaaacat
cccagctcttcagggccatttgcaggacctcctaagacatctagctctttggggacaact
aaacattctagctcagtacacagctctgcaggaacatcaaagccccctggcttagtaaaa
ctgtcaggttcttcaggagatatgaaaccacccaaacgacctcttccggcagatattgca
gagagttctaattcgttacacaaggataagaaacaatttgagagttccagttcacacaag
gatagaaagccagcattgattgttaaactgaagattcctgcttccaagttaaagcggatt
gtctcatcacctcgtaatcctaagccaaaagctccttcctcatctccatccatgtccaat
ccgagacggccgtccccgaaaccatcaccgaagccatcctcaaaaccttcgcctgcatta
acacaaccgatcagagctagccctgctctttctttctcctctagttcatcgggtcataca
tcatcaaatgtcaagaagccatcaagttcaactcacgtcgcagcacctatccgaaaaccc
cttcctgaaggccgaaaacctttaccagattcggcacaacatcttccttcggcaccccct
acccctggcgatgtacctaaaaaaccaaccatcaaacttaactttaaacctaagcctaaa
ccttcattctcttga
DBGET
integrated database retrieval system
