Sclerotinia sclerotiorum: SS1G_05691
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Entry
SS1G_05691 CDS
T01071
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03018
RNA degradation
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_05691
09123 Folding, sorting and degradation
03018 RNA degradation
SS1G_05691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_05691
03041 Spliceosome [BR:
ssl03041
]
SS1G_05691
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SS1G_05691
mRNA degradation factors
5'-3' decay
Lsm complex
SS1G_05691
Spliceosome [BR:
ssl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
SS1G_05691
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
5489164
NCBI-ProteinID:
XP_001592770
UniProt:
A7EK45
LinkDB
All DBs
Position
Unknown
AA seq
84 aa
AA seq
DB search
MASQLLPLELIDKCVGSKIWVVMKGDKEFTGTLTGFDDYVNMVLEDVIEFDHQSGNQTKL
PKILLNGNGIAMLVPGGEGPIGGS
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcagcttctccctctcgaactcatcgataaatgtgtcggttccaaaatctgg
gttgtaatgaaaggcgacaaagaattcactggcacccttaccggtttcgatgactatgtc
aatatggttttagaagatgttattgaatttgatcaccaatctggaaatcaaacaaagctt
cccaaaattttactgaatggtaacggtattgctatgttggtaccaggtggagaaggacca
attgggggatcatga
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integrated database retrieval system
