Sclerotinia sclerotiorum: SS1G_05720
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Entry
SS1G_05720 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SS1G_05720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssl04121
]
SS1G_05720
03036 Chromosome and associated proteins [BR:
ssl03036
]
SS1G_05720
Ubiquitin system [BR:
ssl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
SS1G_05720
Chromosome and associated proteins [BR:
ssl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
SS1G_05720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
F-box-like
Beta-prop_SCAP
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
F-box
Beta-prop_IFT122_1st
Beta-prop_DCAF12
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_like
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_IFT140_2nd
F-box_4
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
5489394
NCBI-ProteinID:
XP_001592799
UniProt:
A7EK74
A0A1D9Q4X9
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MSSSLRRSPPDEGYSEHPLTVINQFKFEDLPSWLADLSPEDRAEYILDIMSRLPTSEVWD
IVGRLKPRLKIDFFFHLPSEICLRILSFLDPVSLIRTASTSRHWQMLAFDRKLWEQLYIR
DGFRIIRSEVTKFEYPGGQPSWMSSRTGFDLNLPAKRKFTTNSQRMVSSPDRTNDNQDLD
LMKQTSIFGPASTREIKQSPLAEDAIMMDAPVLPMDSGNVQTSFSSAERIMPGGKGKGVS
RPRQLPTLAVVDRSDGEEKLNWHYLYTQRRRLEANWEAGKFTNFQLPHPMYPEEGHTECI
YTIQHTQNYLVSGSRDKTIRVWDLERRRLALPPLAEHLGSVLCLQFDPDPEEDLIVSGSS
DATIIIWRFSTGKIVQRLTTAHRESVLNVKFDKRVLVTCSKDKTIKVFNRRPINGGIINE
SASIQIPNLGFENNPSAGPTIPPYTNICTLQGHGAAVNAVQVLGDEVVSASGDRTVKIWN
WKKNTCTRTLLGHNKGIACVQYDGRRIVSGSSDNEVKVFDKESGLEVASLRGHTNLVRTV
QAGFGDLPYSAEEEREDAKRIDREYFKAVNGGLVDQSYQQGRLKNSGSSKPEDITAFGAK
LPPGGGGCKYSRIVSGSYDESIHIWRRDKEGVWKPQHTLRQEEGSRSAIRQWARVPRSIP
NKNAAWLLGLTPGSAGDESPLGDISKLAPEDQVDKAIAAGAIGLRQTLNEYPDLLLHEYL
RVAINRLTDHTKHLMNLVFVAALQARGCDLSDLPPLRNDSNTTTAPVTSTAAPIPPTMPN
RGMPLGGPHPTHARVFKLQFDARRIICCSQTPTIVGWDFANGDKDIIEASRFFAPME
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtctagctctcttcggaggtctcctcctgatgaaggctatagtgaacatcctttgact
gttatcaatcaattcaaattcgaggacttgccttcatggcttgcagatttatctccagaa
gatcgtgctgaatatattttggacatcatgagtagattaccaacgtcggaagtatgggat
attgttgggcgccttaaacctcgacttaaaattgatttcttctttcacttaccatcggag
atctgtttgaggattctcagcttccttgacccagtctcactaataagaaccgccagcacc
tcgcgacattggcaaatgttagcattcgatcgaaaattgtgggaacaactatatatacgg
gatgggttcagaattatcagatcagaggttacgaaattcgagtacccggggggacaacct
tcgtggatgagctcaaggaccggcttcgacctcaatcttccagccaagcgcaaattcacc
accaattcacagcgtatggtatctagtcctgatcggactaacgacaatcaagacttggac
ttgatgaagcagacgtcaatatttggaccggcaagcacaagggaaatcaaacaaagtcct
cttgcggaagacgcgatcatgatggatgcaccagtcttaccaatggatagtggcaatgtt
cagacctcattttctagcgcagagagaattatgcctggaggaaaaggaaaaggagtctcg
cgtcccaggcaactacccactctagccgttgtagaccgtagtgacggggaagagaaactt
aattggcattatctctatacccaaagaagacgcctagaagccaattgggaagctggaaag
tttaccaactttcaattaccgcatcctatgtatccagaagagggtcatacagagtgtatc
tatactattcagcatactcagaattatctggtcagtggtagccgtgataaaaccatacga
gtctgggatcttgagagaagacgccttgctcttcctcccttggcagaacatctcggatca
gtactctgcctccagtttgaccctgatccagaagaagatcttattgtctctggaagcagt
gatgccacgatcatcatttggcggttttcgacaggtaagatcgtgcaaaggttaacgaca
gcacatagagaatcagttttgaatgttaaatttgacaaacgtgtgcttgtcacctgttcg
aaagataaaactatcaaagtattcaatcgccgacctatcaacggaggtatcataaacgaa
tcagcttccatccagataccaaatcttggcttcgaaaacaatccctctgcgggtcccacc
ataccgccgtacacaaatatctgcacattacaaggtcatggagctgcggttaacgccgtt
caagtattgggtgatgaggtcgtgtctgcttcaggcgatcgaacagtaaaaatctggaac
tggaaaaaaaacacttgcactcgaaccctattgggtcataacaagggaatcgcgtgcgtt
caatacgatggtcgtcgtatagtgagtggtagcagtgacaacgaggttaaagtcttcgac
aaagaatccggtcttgaagtagccagccttagaggtcatacgaacttggtgaggaccgtc
caagctggatttggtgatttaccatacagcgcggaagaggaaagagaggatgcaaagcgg
attgatagagaatatttcaaggctgtgaacggtggattggtcgatcagagttatcaacaa
ggtcgtctcaaaaattctgggtcctcaaagccagaagatatcactgcttttggtgctaaa
ttaccaccgggtggtggaggttgcaaatatagtcgtatcgtctcgggatcctatgatgag
tcgattcatatatggcgaagggataaagaaggtgtctggaagcctcagcatactctccga
caagaggaaggttcccgaagtgcaatcaggcagtgggctagagtacctcgaagcattccc
aacaaaaatgcagcatggctcctggggctgacgcctggatcagcaggtgacgagtcaccc
ttgggagatatttctaagcttgccccggaggaccaagttgacaaagcaattgcggctggt
gcaataggtctacgtcaaacgctcaatgagtacccagatttactgcttcacgaatacttg
agagttgctatcaatcgtttgacagatcacacaaagcacttgatgaatcttgtttttgtt
gcagctctacaggcaagaggctgcgatttatctgacctgcctcctttgcgcaatgattca
aatacgactacagcaccggtaacaagtactgctgcaccaattcctccaacaatgcccaat
cgtggaatgcccctaggtggtcctcatccaacgcatgctcgtgtcttcaaacttcaattt
gatgctcgtaggatcatatgctgtagtcaaacaccaacgattgtgggctgggattttgca
aatggtgataaggatattattgaagcaagtcgattctttgctccaatggagtag
DBGET
integrated database retrieval system