Sclerotinia sclerotiorum: SS1G_05895
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Entry
SS1G_05895 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SS1G_05895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssl03021
]
SS1G_05895
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_05895
Transcription machinery [BR:
ssl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SS1G_05895
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SS1G_05895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH_RBM22
zf-CCCH_12
zf-CCCH_DUS3L
zf-CCCH_9
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
5489050
NCBI-ProteinID:
XP_001592973
UniProt:
A7EKP8
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MIILWIFLFAKDNWQVASIPENGKYAKLLFVDPLHFENRDTRSILHVKDKAHLTRLTKRL
DTYIELRYIHKYLHDQHKAPVYKFSFTPFLFNNFRMGISPDRPTCKAYLQGHCPLGSNCP
DKHATNPNNTWNFNNMVCKHWLRGLCKKGETCEFLHEFNLRKMPECNFFVKNGYCSNGDE
CLYLHVDPASKVGNCPHYDKGFCPLGPRCSKKHIRKAICEFYLAGFCPDGSKCKKAHPRW
PSDLPKPTIKVERDPEEVAEEQARIRENAEREADRERGFPEGRPRQRWRGGFGFRGRGGG
GERGQRGRGH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcattttgtggatctttttgtttgctaaggacaactggcaagtggcaagtattcca
gaaaatggaaaatatgctaagctcctatttgttgatccacttcacttcgagaaccgtgat
acacgctccattctccacgtaaaagacaaggcacatttaacccgtctcacaaaacggctc
gacacttacatcgagcttcgctacattcacaagtacctacatgaccaacacaaagcgcca
gtgtacaagttttcattcacgccctttttgtttaataacttccgcatgggtatttctccg
gatcggcctacgtgtaaagcatatcttcaaggacactgccctctcggtagtaattgccct
gataagcatgccaccaatcccaataatacatggaacttcaacaacatggtatgcaaacat
tggctgagaggcctttgtaagaagggtgaaacctgcgagtttcttcatgagttcaaccta
aggaagatgccggaatgtaacttttttgtgaagaacggctattgttctaatggagatgaa
tgtctatatctacatgtcgatcctgcctctaaggttggaaactgcccccattacgataaa
gggttttgcccacttggtcccaggtgctctaaaaagcatatccgcaaggctatctgcgaa
ttctacctagcaggattttgtcccgatggatcaaaatgtaaaaaggcacatccaagatgg
ccttctgacttaccgaagccaactatcaaggttgagagagacccggaagaggttgccgaa
gaacaagcgagaattagagagaacgctgagagagaggcggatagggaaagaggattccca
gaagggcggccgagacagagatggagaggtggttttggctttcgcggaaggggtggtgga
ggagaaaggggccaacgaggacgcggacattga
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