Sclerotinia sclerotiorum: SS1G_06004
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Entry
SS1G_06004 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl04138
Autophagy - yeast
ssl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
SS1G_06004
04148 Efferocytosis
SS1G_06004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_06004
Membrane trafficking [BR:
ssl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
SS1G_06004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
TPR_VPS8_2
VPS8_N
zf_RING_Vps8_fungal
zf-RING_Vps41
Beta-prop_EML
zf_RING_Vps8
Beta-prop_HPS5
PHD_NSD
zf-RING_UBOX
zf-C3H2C3
zf-RING_5
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
5489194
NCBI-ProteinID:
XP_001593082
UniProt:
A0A1D9Q4J6
A7EL07
LinkDB
All DBs
Position
Unknown
AA seq
1607 aa
AA seq
DB search
MSPSSENSNSGEEDIVDEHDVPANGYKDTPKDMGAGDVEHLAGGRISELLQEERDEGIST
PQKLGNGTNPYKKFQDTENMSEDGSVGAPPRRINSPIDSILSIPDDSPSVQGSVLSSPAG
SGILPSVASRRGLDSPTPSFRPFDRRFSSRLSISSLNVPRSSSPGFMRPHSRQISMNSQM
LQDAGETDTPSPPWEVVRWTKLKKLSGQAFSEVGRRNFGTTTCIAVSASIVLGTSKGIIL
IFDYHQNLKSIIGPGTKAVESGAVTSITVSADHLVVAGGHANGSIFTWETARSARPFLHI
PSLEPSQLANRSADGHAPDIAVRHLGFLGTRHTALVSADDRGMAFSHLATRGMGAVGRTV
RTTRILGRYPNDVGPSGKPRKPSTVLAFSPLPLGNVEKGTDTLGLTAILTPYLLVIVSTT
PIAETQHKAARPKEVAAHSTMSGCLAWFPAVKLKVPDPEDGSQSSKVKLVYCWSNILTVL
DVEETPSDNKDKPSSLSFKPRNRWKAEEAIVAVQWLSRSVLTVLTITQRLIVLEDVSMRM
TEAFDLVHKHIFHQDLFSEQLHTLVEQLDEEDPSMHGVVADAFYMSFKAYKSRMFLLGFN
DVSIGTLSNWADRLIALMEDGDYIGAIQLATSYFTGDADKLTIGLPEDTALRHSMVQDKL
VEIMTASLKFAFGQRQKYPAATDDHLKRLAEACFEASLSIDDIDFLFDEAFEWYEDGESE
GIFLEVLEQYILDQRITSIPPTVVKSMVSYFVSKGFEGRLEEMICHMETTTLDIDEVTTL
CKQHNLYDALIYVWNQALHDYITPLIDLLTLLVPFVQDGESFPAGNVVEDPIFGINALKM
FPYMSYTFTGRVYPTGDQLEDQEAMNAKAELYWFLFSGKTISWPRGNTEPFLTKPNNEVE
PSFPYLRMVLKFDAPSFLSALNEAFEDSFLNDTLERAVNGGSSRDMLEEHVFGLSVNRQY
IVTILLEVMNANEFSPEDTIYLDMFIARNLPKFPQYLLLSGTALHKVLTGLCNYPGEDLA
DDAQLSAEYLLSVYYPTDLASLMPLFQKAGFYRVLKSIYKADKQYSQLVQAYFEDPEDRE
NIFDCISDCLRPRSGLTKRQIRELHEVLEKHASDLVELDAEKAALTIQNYAPALHEKMLS
SLPELSEAQYVYLHSIMETTTGQEETSKRPPPQEFTEQYVQLMCRYDTQHVVHYVELVQA
SDLRLDYVLPYMEESGVIDAAVVLMAREGRIRAGMDRLIEHLKMLEATLVGILGAPAEAM
QSMKASEAVEDLLTALQKYINVGIWLCQRQTSPQSNYPNATTNGRKSSGKLELLAEEVLW
LDLIDVAVQMTRKISPVLEDAKVSKPKELDDAKPTAQLRTLVQRTFTALLTSTSTPTPSG
ANLSFLRILRAFLTKASISSPNLSDLRAVLASVFSAYAYEENILSLSNRLLDKDLFVNVQ
SATNLRQRGWRPRGSTCEGCGRRAWGPGVSGDVFSQWEERQEREGQKRKNQQILLSGGAP
ERGKELALASSNSLPKFDGESSGNGKGKGKAKGMDEQSAGDSGGGMNGQQGDDNNHENKI
RQEPGPLVVFACRHIYHRSCLETMRRGENAAKDGFHDDREFRCPIDG
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctcttcggaaaacagtaatagcggggaggaagatatagttgatgaacacgat
gttcctgcaaatggatataaagatacgccaaaggatatgggtgcaggggacgtagagcat
ttggctggaggtcgaatttctgagctgctacaggaggagagagatgaaggcatctctacg
ccgcagaagctaggaaatggtacgaacccgtacaagaaatttcaagataccgagaatatg
tctgaggatggatctgtgggagcacctcctaggaggattaatagtcctatagactcaatc
ttatccattccagacgattctccctccgttcagggttccgtgctgtcttctcctgctggc
agtggtatattgccatctgttgcatctaggcgtggtcttgatagccctactccatcattt
cgtccatttgaccggcgattctcttcgcgtctttctatatcctccttgaatgttcctcgc
tccagttcgcctggtttcatgagaccgcattcgcggcagatatcaatgaatagccagatg
cttcaagatgcaggggagacagacacaccctctcctccttgggaggttgtacggtggacg
aaattgaagaaacttagcggacaagcattttccgaagttggcagacgtaattttggtaca
acaacatgcatagcagtttctgcatctatagtgctaggaacatcaaagggaataatttta
atttttgattaccatcaaaaccttaaatccataattgggccaggcactaaagctgtggaa
tctggtgcggtaacatctattaccgtatctgctgatcatcttgtggttgctggtggccat
gccaatggcagtatcttcacgtgggaaacggcaagatcagcccgcccgtttcttcatatt
ccgtccctagaaccttctcaattagcgaatcgcagtgccgatggccatgctccagacatt
gcagtccgacatttggggtttttaggcactagacatacggcccttgtgtctgcagatgat
cgtggaatggctttttcgcatcttgcaacaagaggtatgggtgcggttggacgtactgtt
cggacaactaggatactcggtagatatcctaacgatgttggtccttccggaaagccgcga
aagccaagcactgttttagcattttcacctctcccacttggaaatgtagaaaaggggact
gataccctaggtttgactgccattttgactccttatctactcgtgatcgtatccacaact
ccaatcgctgaaactcagcacaaagctgctcgaccgaaggaggttgctgcccatagtacc
atgagtggatgtcttgcatggtttcctgccgttaagctgaaggttccggaccctgaagat
ggtagccagagctctaaagtcaagcttgtttattgttggtccaatattttgactgtattg
gatgtggaggaaactccatctgataacaaagataaaccatcgagtctatccttcaaacct
cgtaatcgttggaaggcggaagaagctattgttgccgttcagtggctcagtcgatccgtg
cttacggtattgacaatcacacagcgcctaatagttttggaagatgtaagtatgcggatg
actgaagcattcgatttagtacataagcatatcttccaccaagatttgttttccgaacaa
ctacataccttggtggagcaattagacgaagaagacccgtccatgcatggtgttgtggca
gatgcattttatatgagcttcaaagcttacaaaagtcggatgttcctacttggcttcaat
gatgtatcaataggaacattatcaaactgggcagatcgactaatcgcattgatggaagat
ggtgactacattggagctattcaattggcgacgtcttatttcacaggtgatgccgacaag
ctgactattggattacccgaggatactgcattacggcattctatggtgcaagacaaactg
gtcgagattatgactgcttctctcaagtttgctttcggtcaacgacagaaatacccagct
gctacagatgatcacctcaaacgattggctgaagcttgcttcgaagcatctctaagcatt
gacgatattgacttcctcttcgacgaggcttttgaatggtacgaggacggggagtcggag
ggtattttcctcgaggttttggaacaatatatattggatcaacgcattacctcaatacca
cctactgttgtcaaatctatggtttcttacttcgttagtaaaggttttgaaggtcgtcta
gaagaaatgatatgtcacatggagacgacaacattagacatcgacgaagtcactacgtta
tgcaaacaacacaatctttacgatgccctcatatacgtctggaatcaagcgctgcacgat
tacataactcctctcattgatctcctcacattgttggtaccttttgtccaagacggagaa
tcctttccagctgggaatgtggtggaagatcccatttttggcattaatgcactgaagatg
ttcccatacatgtcatacacatttacgggccgagtctaccctaccggcgatcaactcgag
gatcaagaagctatgaatgctaaagccgaactttattggtttctcttctctggaaagaca
atttcttggcccagaggaaacactgagccattcttaacaaagcccaataacgaagttgaa
ccttcgtttccgtacttaaggatggtccttaagtttgatgcgccaagtttcctcagtgct
ttaaacgaagcattcgaggattcctttcttaacgacacgctagagcgagctgtgaatggt
ggctcaagtcgtgatatgttagaggagcatgtatttggcctttccgtcaacaggcagtac
atcgtcacgatactcctagaggttatgaacgccaatgagttttcaccagaagatactatc
tatttggatatgtttatcgctcgaaatctacctaaatttcctcaatatttactactttct
gggacagctctgcacaaagttttgacgggcttgtgtaattatcctggtgaagatcttgcg
gatgatgctcaacttagtgcagaatacttactttcagtatactatccaaccgatctagca
tctttgatgcctttatttcaaaaggctggtttttaccgagtcctcaaaagtatatacaaa
gcagacaagcaatatagtcaactggttcaggcatattttgaggatcccgaggatcgtgaa
aacatttttgattgcatatctgactgcttgagacctcggtctggattgaccaaacgccag
attcgggagctgcatgaagttctcgagaagcatgccagtgatctggttgagctcgatgcc
gagaaggctgctctaacgatccagaattatgctcccgctctccacgaaaagatgttgagc
tcacttcctgaactctcagaggcgcagtatgtctatttgcacagtattatggaaacgaca
accggacaagaagaaacttctaaacgcccaccccctcaagagttcaccgagcaatacgtt
caacttatgtgcagatatgacactcaacatgtagtgcactatgttgaattggtgcaagca
tctgatctacggcttgattatgtattgccttatatggaagagagtggcgtcatagatgct
gccgtggtattgatggctcgtgaaggtcgaataagagctggtatggaccggctaatagaa
catttgaagatgttagaagctactctggtaggcatactaggcgctccggccgaggctatg
caatctatgaaggcaagtgaagccgtggaggatcttctcactgcgcttcaaaaatatatc
aatgtgggaatttggttatgtcaacgccagacgtcaccacaatctaactacccaaacgca
actactaatggacgaaagtcttccggaaaactcgaacttcttgccgaagaggtactttgg
ttagatcttatagatgttgcggtacaaatgacccgcaaaatatctccagttctggaagac
gcgaaagtatcgaagcccaaggaactagatgacgcgaagccaactgcccagcttcggact
cttgttcaacgaacatttacagctctgttaacttcgacgtcaacaccaacaccctcgggt
gcaaacttatctttcctgcgtattttacgagcattcttgacgaaggcatcgatctcatca
ccgaatcttagtgatctacgcgccgtactagcctcggtattctctgcttacgcatatgag
gagaatatcttaagtttgtcaaatcgactactcgataaggaccttttcgtcaatgtccag
tctgctacaaatcttcgtcaaagaggatggaggccacgcggttccacttgtgagggttgt
ggtcggagggcatggggacccggcgtttcgggtgatgtattttctcagtgggaggagcga
caggaacgtgaagggcagaaaaggaaaaatcaacaaattcttttgagtggaggtgctcca
gaacgaggaaaggagctagctctcgctagcagtaatagtttgccaaagttcgacggagag
agcagtgggaatggcaaaggcaaaggtaaagcaaagggcatggacgaacaatcggcggga
gattctggaggtggaatgaatggtcagcagggcgacgataataatcatgaaaacaagatt
cggcaagaaccggggccattggtagtgttcgcttgtagacatatttaccatcggtcatgt
ttggagacaatgcggaggggtgaaaatgcggcgaaggatgggtttcatgatgatagggaa
ttcaggtgtcctatagatgggtag
DBGET
integrated database retrieval system
