Sclerotinia sclerotiorum: SS1G_06028
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Entry
SS1G_06028 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K17919
sorting nexin-4
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SS1G_06028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_06028
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssl04990
]
SS1G_06028
Membrane trafficking [BR:
ssl04131
]
SNARE
SNARE associated proteins
Others
SS1G_06028
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
SS1G_06028
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
SS1G_06028
Domain-containing proteins not elsewhere classified [BR:
ssl04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
SS1G_06028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
Vps5
BAR
COG3_N
PHM7_cyt
SHE3
Motif
Other DBs
NCBI-GeneID:
5489481
NCBI-ProteinID:
XP_001593106
UniProt:
A0A1D9Q498
A7EL31
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MDHDDFANIEWQNSQRGHSRSDDESEGPDIDRNDGETQAGSHADAMDLAGVGGGVLECTV
GSPIKENDGTKDAYVSYLVTTHTTFPSFQKPTTSVRRRFTDFVFLYNTLFKEYPACAVPP
LPDKHKMEYVRGDRFSVDFTQRRANSLGRFLTRLTLHPVLRRSAILIIFLESSDWNATMK
SRPSRGASRDEQAAGVFDNFADTFINAFTKVHKPDQRFIEVKGKSDKLDEDLGHIEKIVA
RVARREGDLETDYKELAEQFQRLINLEPGIEPNIHAFSASVEDTSAGIKTLKDHTDQNYL
GSLRDMQAYSTAVKNLLKAREQKQLDFEQLTEYLTKSTNDRDQLASSHGSGALTGAGGFI
RSKIEDVRGVDHEQSRRERLRRLELRIEELTKGVEEAKKTTEAFDEEVVREVADFERIKR
VEFRSQLGALADAHRDFYEGVGKIWEGYVREMGGEVVASGVEA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaccacgacgatttcgccaatattgaatggcagaacagtcaacgagggcattcacga
agtgatgatgaaagcgaaggtcctgatattgatagaaacgatggtgaaactcaagctgga
tcccatgcggatgctatggatctagcaggcgtggggggaggtgttctcgagtgtacagtt
ggatcacctattaaggagaatgatggaacgaaagatgcatacgtatcatatcttgttact
acgcatactacatttccctctttccaaaaacctacgacttctgtccgaagacgatttacg
gattttgtatttttatacaacacgctctttaaagaatatccagcatgtgctgttcctcct
ctaccagataagcataagatggaatatgtccgaggcgatcgattcagtgtcgatttcacc
cagagacgcgccaactcactaggacgtttccttacccgtctcactcttcatcctgttctt
cgtcgcagcgccattttgataatcttcttggagagttcggactggaatgcgacgatgaag
tctcgcccatcgcgaggcgcttctcgagacgaacaggctgcgggagtatttgataatttt
gcggacacattcataaatgcctttaccaaagtccataaacccgatcaacgcttcatagaa
gtcaaaggaaaatccgacaaattggacgaggacctggggcatatcgaaaaaatcgtcgct
cgggtagctcgccgtgaaggtgatttggagacggattacaaagagctagcagaacaattt
caacgtctaatcaatcttgagcccggaatcgagcccaacattcatgcattcagtgcgagt
gtggaggatacgagtgcgggaatcaagacattgaaggatcatacggaccaaaattatcta
ggtagtttgagggatatgcaagcttacagcacggcggttaagaatttattgaaagctcgc
gaacagaaacaacttgattttgaacaattgaccgaatatcttaccaaatccaccaacgat
cgagatcaactagcctcgtcccatggctctggcgctctgactggagcaggagggtttatc
cgctctaaaattgaagatgtgcggggagtggaccatgaacaatctcgcagagagaggcta
aggagattagaattgaggatagaagaattgacgaagggagtcgaagaagcgaagaaaacg
acggaagcgtttgatgaggaagtagtaagggaagttgcggattttgagagaattaagagg
gtagaatttaggagtcagttgggtgcattggcagatgcgcatagggacttttatgagggc
gtagggaagatatgggaaggctatgttagggaaatgggcggcgaggtggtggcgagtgga
gtagaagcttaa
DBGET
integrated database retrieval system
