Sclerotinia sclerotiorum: SS1G_06425
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Entry
SS1G_06425 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssl03009
]
SS1G_06425
Enzymes [BR:
ssl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SS1G_06425
Ribosome biogenesis [BR:
ssl03009
]
Eukaryotic type
Pre-60S particles
Helicases
SS1G_06425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NNH3
CDC45
Phage_YunG-like
TERB2
Duc1
Motif
Other DBs
NCBI-GeneID:
5488646
NCBI-ProteinID:
XP_001592186
UniProt:
A7EM78
A0A1D9QHS1
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MKRKLDVNDVPVPTEEAEAANGKATFASLGLDARLLQGIAKQNFQSPTLVQSKAIPLTLE
GRDILARAKTGSGKTAAYLLPILHSILKRKELSPTQCTSALILVPTRELADQVYKTVESF
TAFCAKDVRAVNLTQRVSDAVQRSLLADSPDIVIATPARASLNANTSALLLTNLTHMVID
EADLVLSYGYDEDLQNVAKIMPKGVQTVLMSATLTSEVETLKGLFCRNPEVLKLEEAEDE
GKGVSQFVVKCAEDEKFLLVYVIFKLKLIKGKCIIFVGDIDRCYRLKLFLEQFGTRSCIL
NSQLPVNSRIHVVEEFNKNVYDIIIASDEHEVLGDEDEPKPEETEEVEADDASGEKEDAK
DAKKETKQPSKKKQKTGKKDKEYGVSRGIDFKNVACVLNFDLPTSSKSYTHRIGRTARAG
QTGMALSFVIPSALYRKHKPTSIESAKDDEKVLAKIIKHQAKKGKEVKPYNFDMKQVDAF
RYRMGDALRAVTSIAVQEAKAREIRQELMKSEKLKRHFEENPSDLYHLRHDGELRPARVQ
AHLKHVPDYLLPKEGKKGITGGDIGFVGMHKTTENRIRKARAANKAKGRGKGRKSDPLKT
FKAKSRK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaaactcgatgtcaatgatgttcctgtaccaacagaagaagcagaggccgca
aacggcaaagctacttttgctagcctaggattggatgcccgtttgctccaaggaatcgca
aagcaaaactttcaatcaccaacgctggtacagagcaaagcaatcccactcacattggaa
ggacgcgacatactggctagagctaagactggatctggaaaaactgctgcgtatttacta
ccaattcttcattcgatattgaagcgaaaggagctttctcccacccaatgcacgtccgcc
ctcattcttgtacctaccagagaactcgcagatcaagtctataaaacagttgaatctttt
acggcattctgcgcgaaagatgtgcgagcagtcaatctgacacagcgagtttccgatgca
gttcaacgatcacttctcgcagactccccggatattgttattgcgacaccagccagagct
tctctgaatgccaacacctcagcgctcttactcacaaatcttacacacatggtgattgat
gaggccgatttagtattatcttatggttatgatgaggatttgcaaaatgttgccaaaatc
atgcccaagggggtccagactgttttgatgagtgccacgttgacaagtgaggtcgaaact
ttgaaaggacttttctgtaggaacccagaggtattgaaattagaggaagcggaggatgag
ggaaaaggtgttagtcaattcgttgtgaaatgcgccgaagacgaaaagttcctcctggta
tatgtgatattcaaattgaagcttataaaaggcaaatgcatcatatttgttggcgacatt
gacaggtgttatcgattaaaattatttttggagcaatttgggacaaggagttgtatcctc
aactcgcaattacctgttaactcacgtatccatgttgtcgaagaattcaacaagaacgtt
tatgatattatcattgcttcggatgagcatgaagtcttgggagacgaggatgagcccaaa
cccgaggaaactgaagaggttgaggcggacgacgctagtggagagaaagaagatgccaag
gatgctaagaaggaaaccaagcaaccatcgaagaagaagcaaaagactggaaagaaagac
aaagagtacggagtatcacgaggaatcgatttcaagaatgttgcctgcgtacttaacttt
gatctcccaacatcatccaagtcatacacccacagaattggccgaactgcccgagcaggc
cagactggtatggcactatccttcgtcataccatctgcactataccgaaagcacaaacca
accagcattgaatcagcaaaagacgacgagaaagtactggcgaaaattatcaagcaccaa
gcaaagaagggcaaagaagttaaaccatacaattttgacatgaagcaagtggatgctttt
cgatacagaatgggcgatgcgctacgagctgttactagtatcgcggtgcaggaggccaag
gcacgagagatcagacaggaattgatgaagagtgagaagcttaaacgccattttgaagag
aatccaagtgatttgtaccatcttcgtcacgatggtgaattacgacctgctcgcgtacaa
gcacatttgaaacatgtgccggactatctcctcccgaaagaaggcaagaaaggaataaca
ggtggagatattggatttgtaggaatgcacaagacgacggaaaatagaattaggaaggct
agggcggcgaacaaggcaaaaggacgtgggaagggaaggaaatcagatccattgaaaaca
ttcaaggcgaagtcgaggaaataa
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