Sclerotinia sclerotiorum: SS1G_06616
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Entry
SS1G_06616 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_06616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssl03041
]
SS1G_06616
Spliceosome [BR:
ssl03041
]
Complex A
U1 snRNP components
U1 related factors
SS1G_06616
Complex B
SS1G_06616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
WW_2
EMP24_GP25L
E3_UbLigase_R4
Motif
Other DBs
NCBI-GeneID:
5488836
NCBI-ProteinID:
XP_001592375
UniProt:
A7EMR7
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MNGINGHAAASALWQEARNADGRVYYYNTITKATQWTKPEDLMTPAERALSNQPWKEYTA
EGGRKYWYNTETKQSSWEMPAVYKEALSKETASPAVAAASVPTFVAGGGFSASQYDQPRD
REPLGEARQIAYGNDVNGSRAQAFVPANNDPDYSTFEEAEAAFLKLLKRHNVKPDLTWEE
VMRSIIKDPQYRALKDPKDRKAAFEKYAVEVRLQEKDRAKERLEKLSSDFATMLRSHPEI
KHYTRWKTARPIIEGETIFRSSNDDDERRQLFQGYIMELKRANMEKEAAMRKAAMDDLVD
LLKGLNLEPYTRWSEAQGIIQSHPRFQGDEKFKTLSKSDMLTAFENHIKSLEKTFNDVRQ
QQKTQKLRRERQNRDRFIGLLRELKAGNKIKAGSKWSQIHPLIENDDRYVAMLGQSGSSP
LDLFWDVVEEEERALRSTRNDVLDVLDLREKISRRNEDDKHQAERHQRRAVDNLRSYIKH
LEPPVRIGDEYERVRSRFEGSEEYLAVPTDELRRSAFDKVIRRLKEKEEDAEKDRSKRRD
RASVDRPTHKDRERDRGHRGSARHDRRSRSPEPDAYEADRRKAIADREKNYRKGGMADTL
LSPSRRDRRDPDIHDRERERDRLMRDRDLDKPRSRREDSMSHYERERRDREDEREKLYRR
RGDPRGSIDELPYGDERSSAPRKRRESEVDVRRDSKRTRRENTPKQRERSPVPPRERRHR
TRTPPAAKIPAKEEPAVHSGSEEGEIEEE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtattaatggtcacgcagctgcctctgcgctctggcaggaagcacgaaacgca
gatgggcgagtttactattacaacaccattacgaaggcgacgcaatggaccaaacccgaa
gatttgatgacacctgcagagcgtgcgctatcgaatcagccatggaaagagtatacggcc
gaaggagggaggaaatattggtataacactgagacgaagcaaagctcatgggaaatgcca
gctgtatacaaggaggctttgtcaaaagagaccgcatcgccggcagttgctgctgcatca
gtaccaaccttcgttgcaggaggtggcttttcggcatctcagtatgaccaaccacgagac
agagaacctttaggagaagctcgtcaaatcgcatatggcaatgatgttaatggaagtcgc
gctcaagcttttgtacctgctaacaacgatcccgattattccacttttgaagaagcagaa
gcagcttttctcaagcttttgaagcgacacaatgttaaacctgaccttacgtgggaagaa
gttatgcgatcgattatcaaggatcctcaataccgggccctcaaagaccccaaggatcga
aaggctgcgtttgagaagtatgctgttgaggttcggctgcaggaaaaggatcgtgcaaag
gagaggcttgagaagctcagttctgattttgctactatgctgagaagccacccagaaatt
aaacactacacccgatggaagacagctcgacccatcatcgaaggggagacgattttccgc
tcctcgaatgatgatgatgaaagacgtcaattatttcaaggctatatcatggaacttaag
agggcgaatatggaaaaagaggccgcaatgagaaaggcagcgatggacgacctcgttgat
cttttaaaagggttaaatcttgaaccatatacaagatggtcagaagcacaaggtatcatc
cagtcacatccgcgtttccaaggtgatgagaaatttaagacactcagcaagtcggatatg
ttgacagcgtttgagaaccacatcaaatctcttgaaaagacattcaatgatgttcgacag
cagcaaaaaacccaaaagctcaggagggagcgtcagaatcgagatcggttcataggtctt
ttgcgggaacttaaagctggaaacaagatcaaggcaggatcaaaatggagtcaaattcat
cctttgattgagaatgatgacaggtacgttgctatgttgggtcagtcaggttcttctcct
ctggacctattttgggatgtggttgaggaagaagaacgcgcattgcgtagcacacgaaat
gatgtattggatgttcttgatttacgtgaaaagatttctcgaagaaacgaagatgataag
catcaagcagagcgccatcaacgccgagccgtggataacttgagatcttatattaagcat
ctcgaacctcctgttcgcattggcgatgagtacgaacgagttcgctctcgttttgaagga
tcggaagaataccttgccgtaccaaccgatgaacttcggcgctctgcttttgataaggta
attcgtcggcttaaagagaaagaagaagacgccgagaaggatcgtagcaagcgccgtgat
agagcttcagttgaccgtccaactcacaaagaccgtgaacgagaccgaggacatcgtggc
tccgctcgtcatgataggcgtagccgctcaccagaacctgatgcatatgaagcagataga
cgaaaagctattgcagaccgcgagaagaactaccgaaaaggtggcatggctgacaccttg
ctttctccaagtcgtcgtgataggcgtgatcctgatatccatgatcgtgaacgcgagcgt
gatagactgatgcgggatcgtgatctcgataaacctcggagtagacgagaagattcaatg
agtcattacgagcgagagaggagagatcgcgaagacgagagagagaagctctacaggaga
cgaggggatcctcgaggtagcatcgatgagttgccttacggcgatgaacgatcaagtgca
cccagaaaaaggagagaaagtgaagtagatgttcgtagggatagtaagagaaccagaagg
gaaaacacacctaaacaacgtgagcgctccccagttcccccacgtgaacggcgtcacagg
actaggacaccaccggctgcgaaaatccccgccaaggaagagcctgctgtccattcaggt
agcgaggaaggcgaaatcgaggaagaatag
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integrated database retrieval system
