Sclerotinia sclerotiorum: SS1G_06785
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Entry
SS1G_06785 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03018
RNA degradation
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_06785
09123 Folding, sorting and degradation
03018 RNA degradation
SS1G_06785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_06785
03041 Spliceosome [BR:
ssl03041
]
SS1G_06785
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SS1G_06785
mRNA degradation factors
5'-3' decay
Lsm complex
SS1G_06785
Spliceosome [BR:
ssl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
SS1G_06785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
5488409
NCBI-ProteinID:
XP_001592544
UniProt:
A7EN86
A0A1D9QIQ7
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MSLSSYVNKKVLILTADSRTLVGTLLSCDQQTNLVLSQTIERIIRPPEDPEASSEVPHGL
YLIRGDNVVVVGLVDEELDDSINWVEVRGAVIGGTKHS
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcactctctagctatgtaaacaagaaagttctaatcttaactgcggattcgagaacg
ttggttggtacacttttaagttgtgatcagcagaccaatctggtcctatcccaaaccatt
gagcgcataattagacctccagaagaccccgaagcctcgagtgaagtaccacacggcctt
tatttgatccgcggtgacaatgtcgttgtagtagggcttgtggatgaggagctggatgat
agtatcaactgggtggaggttaggggtgcggttatcggtgggacgaaacattcatga
DBGET
integrated database retrieval system