KEGG   Sclerotinia sclerotiorum: SS1G_06785
Entry
SS1G_06785        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03018  RNA degradation
ssl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SS1G_06785
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SS1G_06785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssl03019]
    SS1G_06785
   03041 Spliceosome [BR:ssl03041]
    SS1G_06785
Messenger RNA biogenesis [BR:ssl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SS1G_06785
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SS1G_06785
Spliceosome [BR:ssl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SS1G_06785
SSDB
Motif
Pfam: LSM Gemin6 KOW7_SPT5
Other DBs
NCBI-GeneID: 5488409
NCBI-ProteinID: XP_001592544
UniProt: A7EN86 A0A1D9QIQ7
LinkDB
Position
Unknown
AA seq 98 aa
MSLSSYVNKKVLILTADSRTLVGTLLSCDQQTNLVLSQTIERIIRPPEDPEASSEVPHGL
YLIRGDNVVVVGLVDEELDDSINWVEVRGAVIGGTKHS
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcactctctagctatgtaaacaagaaagttctaatcttaactgcggattcgagaacg
ttggttggtacacttttaagttgtgatcagcagaccaatctggtcctatcccaaaccatt
gagcgcataattagacctccagaagaccccgaagcctcgagtgaagtaccacacggcctt
tatttgatccgcggtgacaatgtcgttgtagtagggcttgtggatgaggagctggatgat
agtatcaactgggtggaggttaggggtgcggttatcggtgggacgaaacattcatga

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