Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K27407 | RNA-binding protein VTS1 |
|
Organism |
ssl Sclerotinia sclerotiorum
|
Brite |
KEGG Orthology (KO) [BR:ssl00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ssl03019]
SS1G_07000
04131 Membrane trafficking [BR:ssl04131]
SS1G_07000
Messenger RNA biogenesis [BR:ssl03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
SS1G_07000
Membrane trafficking [BR:ssl04131]
SNARE
SNARE associated proteins
Others
SS1G_07000
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
615 aa
MSAGHVIGNRNSTPVESTNTSSLRPPSSRAVGSGHHLRASADMAAFSGSPSASRGQARPS
SDFYGTQQIQSQGVSDNDASDSMAQQWIADIDQYENTLEEMAAATLDQDFKDELSAIEQW
FRVLSEAERTAALYALLQQTTQVQIRFFIQVLQQMGKGHPMSGVLSPANFDKDPMSSRLN
DAMNKTNVDGSRNSMGRPPATPSTKRLSALDPSVINSMFPDAAAAIATKKAEYTQKMGNP
PTSNRNSAAYDNRASLTAPLISGPGDSADNNAPPVSPWGSRSNDQANRPKSSSGQTPMGQ
FMQPPPSAGGLRSPRPNQIQGSSNLQNTVINAPDNTGSDMPLLSPYNAGNGNWASMVNTP
MVPNFNTANSNTQADMVANATAMKLAALSTVNNRFALDDVRKYRRARSNDGGQIPPSPGL
PNNMPNANVVMINEHGQILSRDQVLGLQAQQQHSFGGRQSRPSSPGVAMQGGFGQLNFAS
PQNNGFLTAYDGVSPLLNNGMANLSLNAFGMSQHEGYLSDHSEMARGRSPRGRRGSSKPP
EDPTDPSLLQDIPSWLRSLRLHKYTDQLKDMNWTELVELDDEALEKRGVNALGARRKMLK
VFEQVKAARAEGKLS |
NT seq |
1848 nt +upstreamnt +downstreamnt
atgtctgccggccacgtaataggcaatcgcaacagcactcctgtcgagtctaccaatact
tcatcactacggcctccatcttcacgcgctgtcggctcaggtcatcaccttcgagcttct
gcagatatggccgcattttcaggttcaccctctgccagtcgtggtcaagctaggccttca
tcagatttctacggtactcagcaaatccaaagtcagggcgtctctgacaatgatgcttct
gactcgatggctcaacaatggatcgccgacattgatcaatatgagaacacattagaagaa
atggcagccgcaactttggatcaagactttaaggatgagttgagcgcaatagaacaatgg
ttcagagttctgagtgaagccgaacgaacagctgctctgtatgctctactgcaacagaca
acccaagtacagattcgtttcttcatacaagtcctacagcagatgggcaaaggtcatcct
atgtccggtgtattgtcgcccgcaaacttcgataaagaccctatgtcaagtcgactcaac
gatgcaatgaataaaacaaatgttgatggctcaagaaattctatgggtcgtcctcccgct
actccatctacgaagaggctctcagcgctagatccatctgttataaatagcatgtttcca
gatgctgctgctgccatcgccaccaaaaaggcagaatatacccagaaaatgggcaatcct
cccacctcaaacagaaatagcgcagcatacgataaccgtgcttccctcaccgcacctctc
atctctggtcccggagattcggcagataacaacgcacctcccgtctcgccttggggatct
cgcagtaatgatcaggcaaacaggcccaagtcatcttcaggacaaacaccaatgggccag
tttatgcagccacctccctcggctggcggcttgcgctctcccagaccaaatcaaattcaa
ggatcatctaacctccaaaatactgtgattaatgctccagataatactggctctgatatg
ccactactttcaccatataatgcagggaatggaaactgggcctcgatggtcaacacacca
atggttcccaacttcaatacggcaaacagcaacactcaagctgatatggtcgcaaacgct
acagccatgaaattggcggctctttccacagttaataatcgttttgctttggatgatgta
cgaaagtaccgccgtgctaggtccaacgatggcggacagatcccaccttcccctggtctc
cccaataatatgcccaacgcaaacgttgtcatgattaatgaacacggtcagatattgagt
cgagaccaggttctagggcttcaagctcaacagcagcattctttcggaggtaggcagtct
agaccaagctccccaggagtagccatgcaaggtggatttggtcaactcaatttcgcatct
ccacaaaataacggcttcctgactgcgtacgatggagtttcgcccctgctcaacaatggc
atggccaacttaagtctcaacgcatttggtatgagccagcacgaaggttatctttccgat
catagtgaaatggctcggggcaggtcgccacgtggaagacggggtagctcaaagcctccc
gaggatcccactgatcctagccttctccaggatattcccagctggctgaggagtttgaga
ttgcacaaatataccgatcaacttaaggatatgaattggaccgaacttgtggaactagat
gatgaagcgttggagaagaggggtgtcaacgctcttggagcgagaagaaagatgctcaaa
gtcttcgagcaagtaaaagccgcaagagcggagggcaagctctcataa |