Sclerotinia sclerotiorum: SS1G_07128
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Entry
SS1G_07128 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SS1G_07128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_07128
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
SS1G_07128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
VWA
Motif
Other DBs
NCBI-GeneID:
5487808
NCBI-ProteinID:
XP_001591682
UniProt:
A7EP79
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MTEKQATVYVVDLGKTLGECHNGREETDLEYGMRYVWDKVTLTMSTDHKTDGVGIVGFRT
DETNNDLQRSGEQGYENISVLKPLGQFQMTDLEEMQEVIKPNGTEAGDAVSAVVVAVEMI
KEHTTLKSGKPGKFARKIVLVTDGKGFMHGEELDDIAKEISRNDIKLVVIGVDFDDAEFG
FKEEDKDLVKAENEKLLRSFTESCLDGIFGTIAEAIEALATPVVKVTREYNTYTGPLTLG
DPTKYPETAVSIDVARYFKTHQAKPVSARSYVEAGDEELPDADDLTSVKQTRTYKVNDPT
APGGKRDVERDDLEKGYEYGSTIVHISQADEGVTKLQAIKDFSIIGFVPNNYERYLNMGE
SCITIPQKTNEKARMALSSFVHALNELNSCAVARIVKKDGADPLIVILAPFIEPDLEGLV
DVPLPFAEDVRSYRFAPLDKVFNSSGGLMEKHKNLPSKDLKAAMSSFVDSMDLSTAGKDE
AGDPVEYMAIEDTYSPVLHRINQAIRRRAVKPDEGVPPPPDVLIKWSHPPSELVEKSSSQ
LTKLIETADVKKAKAKRNREVVKPLSGLDVEALLGREKRQKITVDNAIPEFKRTLASTDS
TESVTKVTREMGDTVRTLLKRSTGNSTWAQAEEYLRVMRTELIDLVEPEVYNNFIEKFKK
QLQNEDFDRMFWFDIVRKNKLGLIHTGEASNTEKTEDEARQVCAF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaaacaagcaaccgtctacgtcgtggacctaggcaaaactctcggagaatgc
cacaatggacgcgaggaaactgatctggaatatggcatgcgatacgtatgggataaagtc
acgctgaccatgtctactgaccacaagactgatggcgttggtattgttggatttcgtact
gatgaaaccaacaatgatttacaacgcagcggagaacagggatatgaaaatatatccgta
ttgaagcctcttgggcaattccagatgacagatttggaggaaatgcaagaggttattaaa
ccaaatggtactgaggctggagatgctgtatcagcagttgtagttgcggtggaaatgatt
aaagaacatactacgttgaagtctggaaagccaggtaaatttgctaggaagattgttttg
gttactgatgggaaagggtttatgcatggagaggagcttgatgatattgccaaggaaatc
agtaggaacgatataaaactagtcgtcataggggttgattttgatgatgcggaatttggg
ttcaaggaggaggataaagatttggttaaggctgaaaatgagaagctcctgagatccttc
acagaaagttgcttagatgggatatttggtactatagcggaagccatcgaagctctcgca
acacctgtagtcaaagtaacaagagagtataatacttacacaggaccactcactttaggt
gatccgacgaaatatcctgaaacagctgtatcgatagatgtcgctcgatacttcaaaaca
catcaagccaaacctgtctccgcaaggagttatgttgaagcgggtgatgaggaactcccg
gatgctgatgatcttacctcggtcaagcagacaaggacttataaagtcaacgatccaacc
gctcccggcggtaagagagacgtcgaacgagacgatctggaaaagggttatgaatatggt
agcactattgttcatattagtcaagcagacgaaggtgtcacaaagcttcaggcaataaag
gatttctctatcatcggatttgtgcccaacaattacgagagatatctcaatatgggagaa
agttgcatcactattcctcaaaagacaaacgaaaaggcacgaatggcattatcatctttt
gtccatgctctgaatgagctgaattcttgtgctgttgccagaatcgtcaagaaagatgga
gcagatccactgattgtaattcttgctccattcatagaaccagatttagagggccttgtt
gatgtgcctcttccttttgctgaagatgtacgaagttatcgattcgcgccactagataag
gttttcaatagttctggcggtctaatggagaagcacaaaaaccttccaagcaaagatttg
aaagctgcaatgagcagtttcgttgatagcatggatttatcgacagccggaaaggatgaa
gcaggtgatcctgtagaatacatggccatcgaagatacttactctcctgtgcttcatcgt
atcaatcaagcaatacgcagacgtgctgttaagccagatgaaggtgtaccgccacctcct
gatgtcttaatcaaatggtcacatcccccttccgagcttgtcgaaaaatcaagtagccag
ctcacaaagttgattgaaacagcggatgtcaagaaagctaaagccaaacgcaaccgagaa
gtcgtcaaacctctttccggtctcgatgtagaagctcttctcggtcgagaaaagcgccaa
aagatcaccgtagacaacgctatcccagaatttaagcgaacacttgcaagcaccgattcc
accgagagtgtcaccaaagttactcgagaaatgggcgatactgtccggacactactcaaa
cgaagtactggaaattccacctgggcacaggctgaagagtacctgagggtcatgagaact
gaattgattgatctggttgaaccggaagtctacaataacttcattgagaaattcaagaaa
caacttcaaaatgaagatttcgataggatgttttggtttgatatcgtgaggaagaataaa
ttaggattgattcatacgggcgaggcaagcaatactgagaagacagaggacgaggccaga
caggtttgtgcattttag
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