Sclerotinia sclerotiorum: SS1G_07615
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Entry
SS1G_07615 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03022
Basal transcription factors
ssl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SS1G_07615
09124 Replication and repair
03420 Nucleotide excision repair
SS1G_07615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssl03021
]
SS1G_07615
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_07615
Transcription machinery [BR:
ssl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SS1G_07615
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SS1G_07615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Tfb4
Motif
Other DBs
NCBI-GeneID:
5487589
NCBI-ProteinID:
XP_001590991
UniProt:
A7EQL3
A0A1D9QFI2
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MADSDGEYVDDLSDDDIGAPAIVNAGHGTRSTGAAAGPAGSTTREKATNGGGNRRRAAWE
DIQRSWDTVVEGADGSINSAVEGLREANKRKRLLRDTTPLQRGIIRHLILILDLSFSMTE
KDMRPTRYLLTLRYASEFVTEYFEQNPISQLGIIGMRDGIAVRISDMSGNPTEHIERLKS
LRVDQGQGNPSLQNALEMSRAALFHAPSHGTREILIIYGALLTSDPGDIHETISSLIADR
IRVSIVGLAAQVAICAEICSRTNAGDDTAYSVALNEEHFRQLMMATTTPPVTRTKKQSHS
SLLMMGFPSRTLGPGKSMSFCACHGKLSRGGYLCSRCGSKVCSLPAECPACGLTLILSTH
LARSYHHLFPLRNWVEVLWKDAGKTRACYGCQAPFPRRDEHEKGAPEPGLKSMSESGRYA
CEVCGNHFCIDCDVFAHDVVHNCPGCQSDTRGLISGPAGRGAGGAPARTTEKDVDAMIE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcggatggtgaatatgtggatgatctctcagatgatgatattggagccccc
gccattgtaaatgccggacatggcacgcggtctactggagctgcggcggggcccgctgga
tcaactaccagagaaaaggctacaaatgggggaggtaatagacggagagctgcctgggaa
gacattcagagaagttgggacactgttgtcgaaggagcagatggtagtatcaattccgcg
gttgaggggttgagggaggccaacaagaggaagagattgctgagagatacaacgccctta
cagcgaggtattatccgccatctaatactcattctcgatctatccttctccatgacagaa
aaagacatgcgccccacgcgctaccttcttactctccgctacgccagcgaattcgtcaca
gaatacttcgaacaaaaccctatctcacagcttggcatcattggcatgcgcgatggcatc
gcagtgcgtatttcagatatgagtggaaatcctaccgagcatattgaacgattaaaaagt
ctccgtgtagaccaaggtcaaggaaatcctagtttacaaaatgcgttggagatgagcaga
gccgcacttttccacgctccaagccatggtacaagggaaatccttattatctacggtgct
cttcttacgagtgacccgggcgatatccacgaaacaatctcctcgctcatagcggaccgc
atacgggttagtattgtaggcctcgcggcccaagttgccatttgcgccgaaatatgctca
cgcactaatgctggggatgatacggcatattctgttgcgctgaacgaggagcacttcaga
caattgatgatggcgactacaacgcccccggtgacgcgtactaaaaaacaatctcatagt
agtttactcatgatggggtttccatctcggacactcggaccggggaaaagtatgagtttt
tgcgcatgtcatggcaagttaagtagaggaggttacctctgttctcgctgcggtagtaaa
gtgtgctcactaccagccgaatgcccggcatgcggtctcacacttatcctctccacccat
ttggcccgctcatatcatcatctattccctttgcgaaactgggtggaagtcctctggaaa
gatgcaggaaaaactagggcttgttatggatgtcaagcacctttcccgagaagggatgag
cacgagaagggagcaccagaacccggattgaagagtatgagtgaaagtgggagatatgca
tgtgaggtctgtggaaatcacttttgcatagattgtgatgtttttgcacatgatgtggtg
cataattgtcccgggtgccagagcgacaccagaggcttgattagtgggcctgctgggaga
ggagcaggaggagctccagcgaggactacggaaaaggatgtagatgctatgattgaatag
DBGET
integrated database retrieval system
