Sclerotinia sclerotiorum: SS1G_07729
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Entry
SS1G_07729 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14299
nucleoporin SEH1
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_07729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_07729
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_07729
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SS1G_07729
Membrane trafficking [BR:
ssl04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
SS1G_07729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Ge1_WD40
FAM171A1-2-B_C
Motif
Other DBs
NCBI-GeneID:
5487357
NCBI-ProteinID:
XP_001591104
UniProt:
A0A1D9QFP2
A7EQX6
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MVCAYEASHLNIISAFTKTTHTHLHTMSPSREATPPPQEGFALLTSTHRDLVEATAFNSY
GTRFATGSADGKIKVYNRHRDGSWNLCDTWGAHNGGEVLELQWLPPTIHPNLIASIGTDG
RFKLWVEDPTLPPNKGRRFNSHNNRPVWETRSHTRAPFLSFSIKHNAEIRHTYIALLDRD
AQLIVYENEEPENMTSWTELDRVNVCEKPARGEEVSFKVAFDLNLEPCYRAIKEGVPRDA
LSLVVASMHKASIWRTKEISHTVSLGSASTKELYLAAELRGHRGLVRDVAWAAGNIRGWD
EVATACKDGVVRVFRVVAGRDAEGMGGRSSDFEKVPEKIIARSSVHIAMENGAKNVPSGI
GAGLAGQRTSRNRQQEAQGRDGAVIHAVKEISRLEVDRAPVWKVEFDADGQLLGSTGDDG
KLMMWRREPTGIWSKSAELAMNRA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtctgtgcatacgaggctagccatctaaacatcatctcagccttcaccaagactacc
cacacccatctacacaccatgtctccaagcagagaagccacaccaccaccccaagaagga
tttgctctcctgacctcgacgcaccgcgatttagtcgaagccaccgccttcaacagctac
ggcacgcgcttcgcaaccggttccgcggacggaaaaataaaagtctacaatcgacatcgc
gatggctcttggaatctatgcgatacatggggcgcgcataatggcggcgaagtgttagaa
ttacaatggctaccacctactattcatcctaacctcatcgcgtctattggtaccgatgga
cgttttaagctttgggttgaagatcccacgttgcctcctaataagggacggagatttaat
tcgcataataatcggccggtatgggagacgagatcgcatacacgggcgccgtttttgagt
ttctctattaaacataatgctgagattagacatacttatattgcgttgctggatcgcgat
gcccaattaatcgtgtatgagaatgaggagccggagaatatgacgtcgtggacggaactc
gatcgtgtgaatgtgtgtgagaagccggctcgtggtgaggaggttagttttaaggtggct
tttgatctgaatctggaaccgtgttatcgggctattaaggagggggttccgagagatgcg
ttgagtctcgtggttgctagtatgcataaagcgagtatttggagaacgaaggagatatcg
catacggttagtcttgggagtgcgagtacgaaggaactttatctcgcggcggagttgagg
ggtcatcggggtttggtgagggatgtggcgtgggcggcggggaatattagggggtgggat
gaggttgctacggcgtgtaaggatggtgttgtgagggtgtttcgggtggtggctggtaga
gatgctgagggaatgggaggaaggagtagtgattttgaaaaagtgccagagaaaattatt
gcacgaagttcggtgcacatagctatggagaatggggccaaaaatgttccttcgggcatt
ggtgcggggttagcaggtcaaagaacaagtcggaatagacagcaagaagctcaaggtagg
gatggagccgtcattcatgcagtgaaggaaatttcgaggttggaagttgatcgagcgccg
gtttggaaggtggagtttgatgctgatggacagttgttggggtctacgggtgatgatggg
aagttaatgatgtggaggagggaaccaacgggtatctggagtaagagtgcagaattggcg
atgaatagagcttga
DBGET
integrated database retrieval system
