Sclerotinia sclerotiorum: SS1G_07770
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Entry
SS1G_07770 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03020
RNA polymerase
ssl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SS1G_07770
09124 Replication and repair
03420 Nucleotide excision repair
SS1G_07770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssl03021
]
SS1G_07770
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_07770
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_07770
Transcription machinery [BR:
ssl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
SS1G_07770
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SS1G_07770
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SS1G_07770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
5487227
NCBI-ProteinID:
XP_001591145
UniProt:
A7ER17
LinkDB
All DBs
Position
Unknown
AA seq
167 aa
AA seq
DB search
MFFLYNLERQVTLHPSYFGRNMHELVTGKLLKDVEGTCTGLYYIITIMDTFNISEGRILP
GSGLAEFTVGYRAVVWRPFKGETVDAIVTSVNAVGFFADAGPLPLFVSAHLIPRDIKFDA
NATPPQFTNNEDSVIEPGTHVRVKIIGTRPEVGAMFAIGSIKEDYLG
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcctctacaatcttgagcgtcaggtcaccctgcacccatcatactttggtcgc
aatatgcatgagctggtgactgggaagcttttaaaagatgtagaaggaacgtgtacgggg
ctctactacattatcacaattatggataccttcaatatttccgaaggaagaatccttcca
gggagtggactggccgagttcactgttggatatcgtgctgtagtttggagacccttcaag
ggcgagaccgtcgatgctattgtaacttcggtcaatgccgtgggcttttttgcagatgct
ggtcctttgccactctttgtatctgctcatcttattcctcgtgatattaaattcgatgca
aatgcaacaccaccccaattcacaaacaatgaggactctgtcattgaaccaggcactcat
gtccgagtgaaaatcataggtacaaggcctgaagttggagccatgtttgctattggaagt
atcaaagaggattatctaggatga
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integrated database retrieval system
