KEGG   Sclerotinia sclerotiorum: SS1G_08079
Entry
SS1G_08079        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03020  RNA polymerase
ssl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SS1G_08079
  09124 Replication and repair
   03420 Nucleotide excision repair
    SS1G_08079
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssl03021]
    SS1G_08079
   03400 DNA repair and recombination proteins [BR:ssl03400]
    SS1G_08079
Transcription machinery [BR:ssl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     SS1G_08079
DNA repair and recombination proteins [BR:ssl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SS1G_08079
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 5487514
NCBI-ProteinID: XP_001591452
UniProt: A7ERX4 A0A1D9QEL7
LinkDB
Position
Unknown
AA seq 146 aa
MATPAPTSRSRAPPAGDEEASTVLKLGEFQDVDALTHSEAALVINALVAKRRGDRKNVNE
TEILSKTQEYLDHFARFKRKENVEAVERLLGSRSELAKFERAQLGSLCCDTADEAKTLIP
SLQDKISDDDLTELLDEITKLMGFTN
NT seq 441 nt   +upstreamnt  +downstreamnt
atggcaacaccggcccctacatctcgctcgcgcgcccctccagcaggtgacgaagaagcc
tctaccgttctcaaactgggagaattccaagacgtagatgcgctcactcattcggaagca
gcacttgttattaacgcgcttgtcgcaaaacgtcgcggtgatcgcaaaaatgtaaatgag
accgagattttaagtaagactcaagaatacctggatcattttgcgaggtttaaaaggaag
gagaatgtggaggctgtggagagacttttggggagtagaagtgagttggcgaaatttgag
agagcacaattgggttcattatgttgtgacacagccgatgaagcaaagactttaataccc
agtttacaagataaaatcagtgatgatgatttaacagagttattggatgaaattacaaag
ttgatgggatttacgaattaa

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