Sclerotinia sclerotiorum: SS1G_08173
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Entry
SS1G_08173 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03030
DNA replication
ssl03420
Nucleotide excision repair
ssl03430
Mismatch repair
ssl03440
Homologous recombination
ssl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SS1G_08173
03420 Nucleotide excision repair
SS1G_08173
03430 Mismatch repair
SS1G_08173
03440 Homologous recombination
SS1G_08173
03460 Fanconi anemia pathway
SS1G_08173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssl03000
]
SS1G_08173
03032 DNA replication proteins [BR:
ssl03032
]
SS1G_08173
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_08173
Transcription factors [BR:
ssl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
SS1G_08173
DNA replication proteins [BR:
ssl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
SS1G_08173
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
SS1G_08173
MMR (mismatch excision repair)
SS1G_08173
DSBR (double strand breaks repair)
HR (homologous recombination)
SS1G_08173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
zf-like
DUF936
RMI1_C
Motif
Other DBs
NCBI-GeneID:
5486748
NCBI-ProteinID:
XP_001590433
UniProt:
A0A1D9QCW2
A7ES68
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MEVAKAQITQGALNAIFNDTDRVVKDFPVPVCQVVQVKPMGAGVDGQAERFRLVVSDVQN
FVQCMLATQANHVIHDGKLTKGCFIRLKNYQANEVKGKRILIILDIDVIESLGTMEKIGE
PTAVKVEVDVKPHNTTIGGGGFYGNKPQPQQPAAQDRALPSRSGPSNSSSHATIYPIESL
SPYAHKWTIKARVTSKSDIRTWHKQNSEGKLFSVNLLDESGEIKATGFNEQCDALYELFQ
EGNVYYITSPCRVQIAKKQFSNINNDYELMFERDTLVEKAEDQDNVPQVRYNFSNIGDLQ
TIEKDSTVDLIAVLKEVGETSEIMSKTTNKPYSKRELTLVDDTGYSVRLTVWGKTATSFD
ASPESIVAFKGVKVSDFGGRSLSLLSSGSMSFDPDIQEAHRLKGWYDSQGRTENFASHSN
MASAGAAGGRQDPLKTVAQIKDEGLGMSEENTDYFSTRATIVYIKQETFCYPSCINENCS
KKVVEENDGTWRCEKCNQTHPKPEYRYILSLNVNDHTGQLWLTAFDEVGRLIMGMSADEM
MELKENDQSALEKAFDDANCKMMTFKCRAKTDNFKEQARVRYQVNSASAVNYGADALKLA
ELIKAYNID
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgcaaaagctcaaattactcaaggtgccttgaatgcaatcttcaatgacact
gatcgtgtagtaaaggactttccggtaccagtatgtcaagtggtacaagtcaaaccaatg
ggtgcgggagtagatggacaggccgaaagattcagactggttgtgagcgacgttcagaac
tttgtacagtgcatgcttgccactcaggcaaatcatgtaatacacgatggaaaattgaca
aagggttgcttcattcgtctgaagaactatcaggcaaatgaagttaaaggcaaaagaatt
ttaattattctcgatatcgatgtcatcgagagtttgggaacgatggaaaagatcggagaa
ccaactgcggtcaaggtcgaagtagatgtcaaaccacacaatactacaattggcggaggt
ggcttttacggaaataaacctcaaccccaacaacctgccgcccaagatcgtgcgctccca
tcccgcagtggtccttccaactcctcatctcacgccaccatatatcctattgagtcactc
tcaccgtacgctcataaatggacaatcaaagcaagagttacaagcaagtcggatatcaga
acatggcacaaacagaacagtgaaggcaagctctttagcgtcaatcttttggatgaaagt
ggcgagattaaggcaacgggctttaatgagcagtgcgatgctttatatgagcttttccag
gaaggcaacgtctattatattacgagtccctgtcgagttcaaatcgcaaagaagcaattt
tccaacattaataatgactacgagcttatgttcgaacgagataccctggtggagaaagcc
gaagaccaagataatgtccctcaagtacgatacaacttttctaacattggagatttacaa
acaatcgaaaaagacagcacagttgatctcatcgctgtgctcaaggaagttggagaaacc
tcagaaattatgtcaaagacgactaataaaccatacagcaagagggagttgacattagtt
gatgatactggatactctgtccgattaactgtatggggcaagactgcaacctcttttgat
gctagcccagagtcgatcgtagcttttaagggcgtcaaagtttcagattttgggggtaga
agtctaagtttgctgtcttctggctcaatgtccttcgacccagatattcaagaggcacac
aggcttaagggatggtacgattcccaaggtcgcacagaaaactttgcctcacatagcaac
atggccagtgccggagcagcaggcggccgccaagaccccctcaagaccgttgcccaaatc
aaagacgaaggtcttggaatgtccgaagagaacacagattatttctcaaccagagccacc
atcgtctacatcaaacaagaaactttctgctacccctcctgtatcaacgaaaattgcagt
aagaaagtcgtcgaagaaaatgatggcacatggcgctgcgaaaaatgtaatcaaacccac
cctaaacccgaatatcgctacatcctctccctaaacgtcaatgatcacaccggccaatta
tggttaacggcattcgatgaagtaggaaggctcataatgggaatgagtgcagatgagatg
atggagttgaaggaaaatgatcaatcggccttggaaaaggcattcgatgatgcaaattgc
aagatgatgacattcaaatgcagagccaaaaccgataacttcaaagagcaagcgagggtc
cgttaccaagtcaattctgcttcggctgtgaactatggtgctgacgccctgaagttggcc
gagttgatcaaggcgtataatattgactag
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