Sclerotinia sclerotiorum: SS1G_08322
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Entry
SS1G_08322 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssl03009
]
SS1G_08322
Enzymes [BR:
ssl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SS1G_08322
Ribosome biogenesis [BR:
ssl03009
]
Eukaryotic type
Pre-60S particles
Helicases
SS1G_08322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
5486702
NCBI-ProteinID:
XP_001590582
UniProt:
A7ESL7
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MGLNSHLLKAISRKGFNVPTPIQRKTIPLVLDNQDVVGMARTGSGKTAAFVIPMIEKLRA
HSVRVGARALIMSPSRELALQTLKVVKEFGRGTDLKCVLLVGGDSLEEQFGFMAANPDIV
IATPGRFLHLKVEMSLDLSSMKYVVFDEADRLFEMGFAAQLGEILHALPISRQTLLFSAT
LPKSLVEFARAGLQEPSLVRLDAESKVSPDLQSAFFSVKGAEKEGALLHILQDLVKMPTG
LPENALNATDNFSKKRKRGPDGPTKKLKPTEHSTIIFAATKHHVDYLASLLRMSGFAVSH
AYGSLDQTARNIQVEDFRTGKSNILVVTDVAARGIDIPVLANVINYDFPPQPKVFVHRVG
RTARAGQRGWSYSLVRDTDAPYLLDLQLFLGRRLLLGRDCGDSPNYAEDVIVGALQRNEV
ESKSEWITKLLYDDDDLTALRNVAGKGEKLYVKTRNSASSESAKRAKEVVASKGWMELHP
LFKDVTNGAEQARLEMLAKISGFRPNETVFEIGQKGKAAHSEAAEIMRHRREKIIPRRQK
EEDEKAAAAAAAAEEDNFDSPAEENDDNDDLEVTVTGGDDDMAEASDGELEVTFSKAAQK
GKGRTLSWKDSENFMSYTPKTINTAEERGYGVHSGSYNTASQNSNFVEAARGVTMDLTND
DGAKSFAEPSKAKGMRWDKKNSKYVARANDEDGSKGIKYIRGESGQKIAASFQSGRFDRW
RKAHKVDRMPRTGEAEREGPASAGGVGRGFGTRYKHKQERAPKEADKYRDDYHVRKKRVA
EAKENRVGSFKDGSGKSEIKSTEDIRKDRKLQERRKAKNARPSKKGKY
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgggattgaactctcatttgttaaaggcaattagtagaaaaggatttaatgtacctaca
ccaattcagcgaaaaacgatacctttagtcctcgataatcaagatgttgttggtatggct
agaactggttctggaaaaactgctgctttcgtcattccaatgattgaaaaattgagagct
catagtgtacgtgttggtgcaagagctttgattatgtcgccgtctcgagaattggcatta
caaacattgaaagtcgttaaggaattcgggcgaggaactgaccttaaatgtgttctactt
gttggaggtgatagtctggaagaacaattcggatttatggccgccaatcctgatattgtt
attgctacacctggtcgatttttacatttgaaggttgaaatgtctttagacttatcatcg
atgaaatacgttgtctttgatgaagccgatcgtctattcgagatgggatttgctgctcaa
cttggcgagattcttcacgcattgccaatttcgagacagactttgttattctcggcaact
ttaccaaagtccttggtagagttcgctagagctggtcttcaagagccaagtttggttcgt
cttgacgcagaaagcaaagtttctcccgatctccagagcgcatttttcagtgtcaaaggt
gccgaaaaagaaggtgctttattgcatatccttcaagatttggtcaaaatgcctactggc
ttaccagaaaatgcactgaatgcaacagacaactttagcaaaaagcgcaagagaggtcct
gatggcccaactaagaaactaaagcccacagagcattcgactatcatattcgcagctact
aaacatcatgtcgattatctcgcttctctactacgtatgtctggatttgctgtttctcat
gcttatggttcgcttgatcaaaccgctagaaatatccaagttgaagatttccggactggg
aaatcaaatatattagtagttaccgatgtcgctgctagaggtattgatattcctgtatta
gcaaatgtcattaattacgacttcccaccgcaacccaaagtttttgttcatcgagttggt
cgtaccgcaagagctggtcaacggggctggagttacagtttggttagagatactgatgcg
ccatatcttcttgacctacaactattccttggaaggagattacttctcggacgcgattgt
ggtgactcgccgaactatgctgaagatgtaattgttggagctttacaaaggaatgaggta
gaaagcaaatcagaatggattacgaagcttttatatgacgacgatgaccttactgccctt
cgaaacgtagctggcaaaggagaaaaactgtatgtcaaaacccgtaactcggcatccagc
gagagtgcgaagagagccaaagaagtcgtagcatcaaaaggatggatggaactacatcca
cttttcaaggacgttacaaatggtgcggaacaagctcgattagagatgctagcaaaaatt
agtggtttccggcccaatgagaccgtctttgagattggacaaaaggggaaagctgctcac
agtgaggctgcagaaattatgcgacaccgaagggaaaagatcattccacgaagacagaag
gaggaagacgaaaaggccgccgcagcagcagcagcagcagaagaagataactttgattct
ccagcggaggaaaatgatgataatgacgatctcgaggtcacagtcactggaggagatgac
gatatggccgaagcatccgacggtgagcttgaagttaccttctcgaaagcagcgcaaaaa
ggcaaaggccggacactatcctggaaagactccgaaaacttcatgtcatacacaccaaaa
actatcaacacagcagaagaacgtggatacggtgttcattctggttcatataacacagca
tctcaaaattcgaatttcgttgaggcagccagaggtgtaaccatggatcttactaatgat
gacggggcgaaatcctttgccgagccgtccaaggcaaaaggcatgagatgggataaaaag
aatagcaaatatgttgctcgagccaatgacgaggacggatctaaaggaatcaaatacatc
cgtggagagagtggtcaaaagattgcagcaagtttccaaagtggtcgatttgacagatgg
cgcaaagcacacaaggtcgatcgcatgccacgaactggtgaagcagaacgtgagggccct
gcaagtgctggtggggtaggacgaggtttcggaacacgatataagcataagcaagagagg
gcgccaaaggaagctgataaatatcgggatgattaccatgtgaggaagaagagggttgct
gaagcaaaggaaaacagagttggttcgttcaaggatggaagtggaaaatcggaaattaaa
agtacggaagatatccgaaaggataggaagttacaggagaggagaaaggcaaagaatgcc
agaccttcaaagaaaggcaaatattag
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