Sclerotinia sclerotiorum: SS1G_08471
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Entry
SS1G_08471 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SS1G_08471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_08471
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SS1G_08471
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
5486644
NCBI-ProteinID:
XP_001590731
UniProt:
A0A1D9QDK3
A7ET16
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MSDRRRINGPPGGTHAPIFSKYLAKDSKNRPERPSRNRQPNVLRKIFLKTGVTPSASGSA
YLELEPSQPSNQSAPGLASLSTSGLKLTCTVHGPRPLSKSAAFSPHMILQTHVKYAPFAS
RRRRGYIRDTSERDLGVHLETALRGVIIGDRWPKSGVEINITILEGEEDHWWGDDKSFGS
STAGGWGMMSVLSGCITVASAAIADAGIDCVDVVSGGVAALVRSPANSEQEDSTSLVLDP
VPSEHKEILAACIVAYLPARDEITDLWVKGDIGHSTESNNDDPSYEELTENAVQAALGAH
RVLIGALKETADIKFRR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcgaaggagaataaatggtccaccaggtggaacacatgcaccgatattctca
aagtatcttgccaaagattcaaagaatcgcccagaacgaccttcaagaaatagacaacct
aatgttctaaggaaaatttttttgaagaccggcgttacaccatcagcttcaggatctgca
tatctcgaacttgaaccatcacagccttcaaatcaatctgctccaggccttgcttccctc
tctacttctggtctcaaacttacatgtaccgttcatggacctcgaccattatctaaatcc
gctgcattctcaccacatatgattctacagactcatgttaaatatgcgccatttgcatcc
agaagaagacgtggatatattagagatacgagtgaaagggatcttggagtacatttggaa
actgctttgagaggagtaattatcggtgatagatggcccaagagtggagttgagattaat
attacgattcttgaaggagaggaggatcattggtggggtgatgacaaatcttttggttca
tcgactgcaggtggatggggtatgatgagtgtactcagtggttgtataactgttgcttct
gcagctattgcagatgctggaattgattgcgttgatgttgtttctggtggagttgccgca
ttagtacgttcacctgccaattcagagcaagaggattctacttcactagtcttggatcca
gtaccatctgagcataaggagattctagcagcatgtattgtggcatatcttcctgctcga
gatgaaatcacagatctttgggtaaaaggagatattgggcactcaactgagtctaacaat
gatgatccatcttacgaagagcttacggagaatgcggtacaagcagctttaggagcacat
cgagttctcattggagctttaaaggaaactgcagatatcaaattcagacgatga
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