Sclerotinia sclerotiorum: SS1G_08581
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Entry
SS1G_08581 CDS
T01071
Name
(RefSeq) conserved hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_08581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_08581
03041 Spliceosome [BR:
ssl03041
]
SS1G_08581
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SS1G_08581
Spliceosome [BR:
ssl03041
]
Complex B
Other components
Prp19-related factors
SS1G_08581
Complex C
SS1G_08581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
Mad3_BUB1_I
TPR_15
SNAP
ARM_TT21
RPN7
Motif
Other DBs
NCBI-GeneID:
5486871
NCBI-ProteinID:
XP_001590841
UniProt:
A0A1D9QEN5
A7ETC6
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MAAPSVPEVKSALTLSIRGKPDLYLISEEDTIYEQDILRDPGSTKPWLAYIEFKFQHGTQ
LEQAFVLERACLQLPRSYKLWKMYLTLRMKHLGKLNPAVFASEYAKVNALYERALILLNK
MPKIWEMYLQFLMLQPLVTLTRRTFDRALRALPITQHNRIWALYRPFANSASGSTAVKIW
RRYMQIHPEDAEDFTELLIEMKLYTEAVKKYMDILNNPKFRSKHGKGHYQLWSEMVDLLV
EHAKEVETGDEVGIDVEKIIRSGIDRFADQRGKLWSGLATYWITRGSFERARDIFEEGIT
TVMTVRDFTLIFDSYAEFEESITGVLMEAAAVRSEKGIVDENADFDLDIRMMRFEQLMDR
RPFLLNDVLLRQNPSNVPEWMKRISLWGDNKVEVVKAYTDAIAAIQPKKAVGQFHELWSN
YAKFYEEGGDLRNARVIFEKAVKVPFKSVAELADTWIEWAEMELRNENFDEAVKIMAKAV
QAPKRSNVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSTLEETKKIYERIFELRIATPQ
TVVNYANLLEENKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFE
QAVEGCPPRFAKVLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSAS
NFGLPSTRPIYERAIAALPDKDARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTSP
TFWSKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARIQAKTDEDGEEAA
DAMAALEREARAPVGFVPASTGPQGGNIKEPEIMVTENPDAIDIDGMDDE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcccagcgtccccgaagtaaaatcagctttaaccttatcaattcgaggaaag
ccagatttatatcttatttccgaagaagacaccatttatgaacaggatatcctacgcgat
ccaggcagtacgaaaccttggttggcatacattgagtttaaatttcaacatgggactcaa
cttgagcaagctttcgttttggaacgagcttgtttacaattaccaagatcttataagttg
tggaaaatgtaccttacattgcgaatgaagcacttgggaaagctaaatcctgcagtattt
gcctccgaatatgccaaagtcaacgcgctatacgaaagagccctcattcttttgaacaaa
atgccaaaaatctgggaaatgtatcttcaatttttgatgctccaaccgctcgttactctc
acgcgccggaccttcgatcgagcgcttcgagctttacctattacgcaacataatagaata
tgggccctctaccgtccttttgcaaattcagcgtcaggctccacagccgtcaaaatatgg
cgacgctacatgcaaattcatccagaggatgccgaagattttactgaattattaatagag
atgaaactctacacagaagcagttaagaaatatatggatatccttaataacccaaagttc
cgcagcaaacacggaaagggacattaccaattatggagtgagatggtagatcttcttgtt
gagcatgccaaggaagtcgaaactggagatgaagtaggaattgacgttgagaaaatcatt
cgaagcggcatcgatagatttgctgatcaaagaggaaaattatggtctggtttagcgaca
tactggattactcggggcagtttcgaacgagcacgagatatcttcgaagaaggcattacg
acagtcatgacggttcgagattttacgttaatattcgattcctacgccgagttcgaggaa
tcaattactggggttctgatggaagctgctgcagttcgatcggaaaagggcatagtggat
gaaaatgccgattttgatttggatattcggatgatgagattcgaacaactcatggatcgc
cgaccatttttactgaatgacgttttattacggcagaaccccagcaatgtccccgaatgg
atgaagcgcatttctctgtggggggacaataaagttgaagtggttaaagcatacactgat
gccattgctgctattcagccgaagaaagccgtcggacagttccacgagttatggtcaaat
tatgccaagttctacgaggagggtggggatttacgtaatgcccgtgttattttcgagaaa
gccgtgaaagtaccatttaagtctgtggcagaacttgcggatacttggattgagtgggcg
gaaatggaattgcgaaacgagaatttcgatgaagccgtcaagattatggcaaaggcagtt
caagcaccgaaacgatctaatgttgactattttgacgaaaccctttcaccccagcaaaga
gttcacaagagctggaagttgtggagtttttacgtagacttggtggaaagtgttagtacc
ttggaagagaccaagaagatatacgaacgaattttcgaacttcgaatcgcgacgccacaa
actgttgtcaattacgccaatttactagaagagaataagtacttcgaggagtctttcaaa
atctacgagagagggcttgatttgttcagctatccggtcgcgttcgaactttggaatttg
tacttgaccaaggcagttgatcgaaaaattggtattgaacgacttcgggatctattcgaa
caagcagtcgaaggatgtccaccgagatttgccaaagtattgtatcttatgtatggaaac
ctagaggaggagcgaggtttagcaagacatgcgatgagaatttacgagagagcaacccga
gctgtctctgatgaagatcgtgcagatatgtttaacttctatatcaccaagtcagcgtcg
aattttggtctaccttcaacgcgaccaatttacgaaagagctatcgcggctttgccagac
aaagatgccagagatatgtgtttaaaatttgccgatatggagaaacgattgggcgaaatc
gatcgtgcaagggctatctacgggcatgcatcacaattctgcgatcctagaacaagtcca
acgttctggtccaaatgggaagcgtttgaggttcaacatggaaatgaggacacattcaaa
gagatgcttcgtatcaaaagaagtgtgcaagcacaatacaatactgatgttaatttcatc
gcctctcaagctcttgcccggattcaggcgaagactgatgaggatggagaagaggctgcc
gatgcaatggcagcattagagcgtgaggcaagagctcctgtcggattcgtaccggcaagc
acaggtcctcaaggtgggaatatcaaagaaccagaaataatggttactgagaatcctgac
gctattgacatagatggaatggatgatgaatga
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