Sclerotinia sclerotiorum: SS1G_09627
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Entry
SS1G_09627 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl04111
Cell cycle - yeast
ssl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SS1G_09627
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
SS1G_09627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssl04121
]
SS1G_09627
Ubiquitin system [BR:
ssl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
SS1G_09627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_SCAP
WDR55
Beta-prop_TEP1_C
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
F-box-like
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Nup120_160
WD40_like
Beta-prop_DCAF12
Beta-prop_RIG_1st
F-box
Beta-prop_VPS8
Beta-prop_LRRK2
Beta-prop_IFT140_1st
Beta-prop_HPS5
PEP5_VPS11_N
WDR54
WD40_CFAP43
PQQ_2
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
5485187
NCBI-ProteinID:
XP_001588994
UniProt:
A0A1D9PRF4
A7EWB8
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MSPTRALTVDTNGDHIPMPQRLEKILSRPRGPPTPNMTTPSADLQSPTHSSHDPPPPPTP
AASPGPNHPQPDWSEAGEKEDIFLSQIRIYFSQSSAPERTRILGDLLNLCTSQQLSFVHQ
YVSPLLKKDPFTTLPEELCLRILSCIDDPKVLARSSQVSKRWRDLLSDDVTWMKLCAKHD
YGRRMSEHQPTAPLTSLRPPPHPVHLASQAGDSFASQSFPGMSAPLPHVPGSSKSFDSAT
ASGVLKRPKIRSYKSHFKQRYLVETAWRTGGQNIARHITQDQGVVTSLHLTPKYIVVALD
NAKIHVFNTDGNAQKTLTGHVMGVWAMVPWEDTLVSGGCDRDVRVWDMANGESIHTLRGH
TSTVRCLKMSDANTAISGSRDTTLRIWDIKTGVCKNVLVGHQASVRCLEIKGDIVVSGSY
DTTARVWSISEGRCLRTLQGHFSQIYAIAFDGKRIATGSLDTSVRIWDPENGSCQAILQG
HTSLVGQLQMRGNTLVTGGSDGSVRVWSLEKMAPIHRLAAHDNSVTSLQFDDTRVVSGGS
DGRVKVWDLKTGQLVRELSAPAEAVWRVAFEEEKCVVMASRANRTIMEVWSFSPPEDVLY
EKSYAQPTPITGPARPLSAIEYRSGSQDQAMQGIITSEASYVRDDVEMADAGPSTVPPQA
TGPTFFHEDD
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctacccgagcgctaacggtcgacacaaatggcgatcacattccaatgccgcaa
aggttagaaaagatcttgagtcgaccaagaggtcccccaactccaaatatgaccactcct
tccgccgatttacaatctcccacccattcaagtcacgatcctcctcctccccctacacca
gcggcaagtccaggtcctaaccacccgcaaccagattggagcgaagcgggagaaaaggaa
gatatatttttatcacaaattaggatatacttcagtcaaagttcggcccctgaaagaacg
aggatattaggagatcttttgaatctttgcacaagccaacaactcagcttcgtacatcaa
tatgttagcccgttactgaagaaggatcccttcacgaccttgccagaggaactatgcctt
cgtattctgtcttgtatcgacgaccccaaagtgcttgcgcgctcatcccaagtttcgaaa
cgttggcgagatctactttcagacgatgtcacttggatgaagttatgtgcgaagcacgac
tatggtcgaagaatgtcagaacatcagcccactgcacctctaacatcacttcgaccccct
ccacatcccgttcatttggcatcacaagcaggggatagttttgcctcgcaatcatttcct
ggaatgagcgcaccgttaccgcatgtccctgggagttcaaaaagtttcgatagcgccaca
gcctcgggcgtattgaagagaccaaagattaggtcatataaatcacattttaagcagaga
tatttggtcgaaaccgcatggaggaccgggggacaaaacatcgcaagacacattacacag
gatcagggtgttgtgacgagtctacatttgacaccaaaatacatcgtagtggcgttggac
aatgctaaaatacatgttttcaacacagatggaaatgcacaaaagaccttgaccgggcat
gtaatgggtgtttgggcaatggtaccttgggaagataccctcgtgagtggaggttgtgat
cgggacgtccgagtatgggatatggctaacggtgagagtatacatactctacgtggacac
acatcaacagtacgatgcttaaagatgtctgatgcgaacaccgccatttcaggttctcga
gataccacgctgaggatttgggacattaaaactggcgtgtgcaaaaatgttcttgtgggt
catcaggcaagtgttcgatgcttagaaatcaaaggagatattgttgtttccggaagttat
gatactacagccagggtatggagtatttcagagggtagatgtctacgaacactccagggc
catttctcccagatatatgctatcgcgtttgatggaaagaggatcgctactgggagtctt
gacactagtgttcgaatttgggacccagaaaacgggtcttgccaagccattcttcaagga
cacacttcactagttgggcagttgcaaatgcgaggaaacacgttggtgaccggtggttct
gacggctctgttcgcgtctggtcactagaaaagatggcgccaattcaccgactagcggct
catgacaatagtgttacaagtttacagtttgatgatacacgagttgtgagtgggggtagc
gatggtcgagtcaaggtgtgggatcttaagactggtcaacttgttcgtgaacttagtgct
cctgccgaggctgtatggagagtggcttttgaagaggaaaagtgtgttgttatggcaagc
cgagctaaccgcactatcatggaagtatggtcattttctccgcctgaagatgtcttgtat
gaaaaatcatatgcccaaccaactcccatcacggggcctgccagacctttaagcgctatt
gagtatcgaagcggtagccaagatcaagctatgcaaggaattataacaagcgaagcatca
tatgtaagagatgatgttgaaatggctgatgctggaccatcaacggttcccccacaagct
actgggcctaccttctttcacgaagatgattga
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