Sclerotinia sclerotiorum: SS1G_09748
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Entry
SS1G_09748 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SS1G_09748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_09748
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SS1G_09748
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SS1G_09748
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
5485393
NCBI-ProteinID:
XP_001589115
UniProt:
A7EWN9
A0A1D9PRG6
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MNRPGVGPQAMRGIPNGFPNQQQMQNRNVSSRIPPGGKMANNGATWAFGGVPMGGAGLGN
PRPNNGPMTSFAQTIGGSSQPATPLDLSEFPSLSGNQPQHNQSTWGAAGARNIGPSANMR
LQQSAGLSAQHAAQQQQQQQQQDELFNSSTQLSNNSGGFRFGAQSAVGQSSQPSSADDFP
PLRNSNGEIGQDRGSGLLQNVGFGGGGGLGFGSGNPPQQARSNGLLSALSGGSRVAPGNR
VASPGSLSGPSTNRSPIDSSRQGLSNLGENEAGGFANTNFGSSSPIPLQEDNDQQFNMPT
ATSSRPDGPSTLTQAQELDPSSAQRNAENADSKVQDPLAHMSDTDRFGLKGFSYMMNNFP
DYAALVTGTDINHLGLDLHSEQPISNQIYSLWDNEPPRPDVARFNLPECYRVLNVAPLES
KMPSFNEEALLFMFYSNPGDKQQLMAARELGNRNWRYHKKLQVWLTKDDLMVPRQLSQQM
EQGYYIFFDVKTWSRQRREFTLSYDDLERVEDRF
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaccaggtgtaggaccgcaggcaatgcgtggcatacccaatggatttccaaat
cagcaacaaatgcagaataggaatgtatcaagcaggataccgccgggtgggaaaatggca
aacaatggagcaacatgggcatttggaggtgtaccgatgggaggagcgggtctaggaaat
ccacgtccaaataatggacccatgacaagctttgcacaaacaataggagggtcttcacaa
ccagcgacaccactcgatctttccgagttcccctcactatcaggaaaccagccccaacac
aatcaatcaacatggggagcagcaggagcgcgtaatattggtccatcagcaaatatgcga
ttacagcaatcagctggattatctgcccaacatgctgctcagcaacagcagcagcagcaa
cagcaagatgaacttttcaactcatcaactcaattatcgaataattccggtgggttcaga
tttggagcacaaagtgcagttggtcagtcgtcacagccgagcagcgcagatgacttccca
cctctgagaaattcaaatggagagatcggccaagaccgcggttccggtctattacagaat
gtggggtttggaggcggtggaggattaggatttggttctggcaacccaccccagcaggcc
agaagcaatggtcttttaagcgcattatctggtggtagtcgagttgcaccaggtaacaga
gttgcttcaccaggaagtttgtcaggcccatccacaaacagatcccctatagactccagt
cgtcaaggtctatccaatcttggagagaacgaagctgggggctttgcgaatacgaatttt
ggctcatcgagtcccataccactccaagaagacaacgatcaacaattcaatatgcctacg
gcaaccagctcgcgaccggatggtccatcaaccctaactcaagcacaggaactcgaccct
agttctgcgcagagaaatgccgagaatgccgattctaaagtacaagatccattagctcac
atgagtgacaccgacagatttggacttaaggggttttcctatatgatgaacaacttccct
gactatgctgctcttgttactggtaccgatatcaaccatctgggtctcgatctacattct
gagcagcccatctcaaaccaaatttactctctatgggataacgagccaccgcgaccagat
gtcgcccgttttaatctacctgagtgttatcgcgttctgaatgttgcccctctcgaaagc
aagatgcccagcttcaacgaagaagccctattgttcatgttctacagtaatcccggtgac
aagcagcagctcatggcagctagggagcttggcaatcgaaactggcgttatcataaaaaa
ttgcaagtttggcttaccaaagatgatttgatggttccccgacaactttctcaacaaatg
gagcaaggctattatatcttctttgatgtcaagacttggtcaagacaacgtcgggaattc
acactgtcttacgatgacttagagagggttgaggatcgattttaa
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integrated database retrieval system
