Sclerotinia sclerotiorum: SS1G_10275
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Entry
SS1G_10275 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03030
DNA replication
ssl03410
Base excision repair
ssl03420
Nucleotide excision repair
ssl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SS1G_10275
03410 Base excision repair
SS1G_10275
03420 Nucleotide excision repair
SS1G_10275
03430 Mismatch repair
SS1G_10275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssl03032
]
SS1G_10275
03036 Chromosome and associated proteins [BR:
ssl03036
]
SS1G_10275
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_10275
DNA replication proteins [BR:
ssl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SS1G_10275
DNA Replication Termination Factors
ELG1-RFC complex
SS1G_10275
Chromosome and associated proteins [BR:
ssl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
SS1G_10275
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SS1G_10275
Check point factors
HRAD17(Rad24)-RFC complex
SS1G_10275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
AAA_22
AAA_16
AAA_24
Rep_fac_C
T4SS-DNA_transf
Rad17
ABC_tran
Motif
Other DBs
NCBI-GeneID:
5484838
NCBI-ProteinID:
XP_001588728
UniProt:
A7EY60
A0A1D9QMF9
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MALIVDKHRPRSLDQLTYHDDLSDRLRALAQSGDFPHLLLYGPSGAGKKTRIVCTLKELY
GGSVEKIKIDSRVFQLSSSSRKLEFNIVSSLYHLEITPSDVGNYDRVVISELLKEVAQTQ
QVDQSAKQRFKVVVINEADGLSRDAQAALRRTMEKYSGNVRLILVANSTSGIIGPIRSRT
LLVRVGAPTEGDIVKVLEKSGKREGWGVSRGFLERVAKESGRNLRRALLMYEAAHAQNET
INDTTPIPPPDWEALLSTIAHSMTIEHTPAQILKIRAQLYDLLTHCIPATTILKTLTWKL
MPLVDDALKSDIVKWAAFYEHRCKTGTKVIFHLEAFVAKFMRVSEEWLMAMEVE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggctctcatagtggataaacatcgtcctcggtctctggatcaacttacttatcatgat
gatttatcggatcgtttgagagctcttgcacaatcgggcgattttccccatctccttctc
tacggaccttctggggccggcaaaaaaacccgcatcgtatgtactctcaaagaactctac
ggcggctccgtcgaaaaaatcaaaatcgattcccgcgttttccaactctcatcttcgtct
cgaaaactcgaatttaatatcgtttcctctttgtatcatttagaaattacgccgtcagat
gtaggaaactatgatcgagtggtgatttcggagttgttgaaggaagtggcgcagacacag
caggtggatcagagtgcgaaacagaggtttaaggttgtggttattaatgaggcggatggg
ttgagtagggatgcgcaggctgcgttgaggaggactatggagaagtatagtgggaatgtt
aggttgattcttgtggctaatagtacgtccgggattattggcccgattaggagtaggact
ttgttggttagggtgggagcgccgacagagggggatattgtgaaggtgcttgagaagagt
gggaagagggaggggtggggggttagtagggggtttttggagagagtggcaaaggagagt
ggtaggaatttgaggagggcgcttttaatgtatgaggcagcgcatgcgcagaatgaaaca
ataaacgacaccacacccattccacctcccgactgggaagcactcctctcaaccatcgca
cacagcatgaccattgaacacacaccggcacaaatcctcaaaatccgcgcgcaactctac
gatctcctcacccactgtatccccgccaccaccattctcaaaaccctaacgtggaaactc
atgccattagtcgatgacgcattgaaaagcgatatcgtcaaatgggctgcgttttatgaa
catagatgtaagacgggtacgaaggtgatatttcatctagaagcttttgtggcgaagttt
atgagggttagtgaggagtggttgatggctatggaggttgagtag
DBGET
integrated database retrieval system
