Sclerotinia sclerotiorum: SS1G_10539 Help Entry SS1G_10539        CDS       T01071                                  Name (RefSeq) conserved hypothetical protein   KO K03018   DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] Organism ssl  Sclerotinia sclerotiorum Pathway ssl03020   RNA polymerase Brite KEGG Orthology (KO) [BR:ssl00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     SS1G_10539  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ssl03021]     SS1G_10539 Enzymes [BR:ssl01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      SS1G_10539 Transcription machinery [BR:ssl03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Core subunits      SS1G_10539 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  5484400 NCBI-ProteinID:  XP_001588093 UniProt:  A7EYX3 LinkDB All DBs Position Unknown AA seq 1459 aa AA seqDB search MPMMSSGESIKAQVVDKIPKRFKELKFGILSNQDIVNQGVIEVSNKTLYNVDNGRTPIPH GPLDPRLGTSSKAGRCETCDKGLQDCNGHFGHVRLPLPAFHIGYLKLIIMILQNICKTCA RVLLTDAERRQFLRELRKPGIDNLKRTQICKKINEQCRKASQCPHCDATNGQIRKVSVVR LAHDKYTKYNKSTAAKKVAPPGMAEYQKSFEEAKKNNTELEKHVKKVYEDLHPLRVLNLF KLITPSDCELLGINPAEGRPEMFLWQFVPAPPICIRPSVAQDGGSNEDDLTAKLAEIVNM SSLIRAALQKGQAVQTIMEQWDFLQLQIAMYVNSDVPGLQQPGFGKAIRGFCQRLKGKQG RFRGNLSGKRVDFSGRTVISPDPNLGIDEVAVPILVAKNLTYPERVQRQNIEKLRKCVIN GPNVHPGAQQIVKKDSNHKISLKFAKRDNEAKFLKIGDVVERHLEDGDIVLFNRQPSLHK LSIMSHYAKIRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEEARTEAINLMGVKNNLS TPKNGEPIISATQDFITAAYLLSSKENFFDRKTFTNICMYMVDSNLHLQLPPPAILKPQA LWTGKQVFSILMRPNKQDNILVNVDAKCRDFVPNMVPPGYANDMEANDGWLVIRNSEVMC GLMDKSTVGSGKKDSIFYVILRDYGPDAAVVAMNRLSKLSARYLTNMGFSIGISDVYPSE ELNKSKARLIAAAYAECEQLIESFKNNTLEKSTGLSMEETLEAKLSGKLSQVRGAAGKEC LRTLYASSSPLVMANSGSKGSAINVAQMVALVGQQIIGGSRVQEGFQDRTLPHFPKHSKQ PPAKGFVANSFFTGLTPYEFIFHAMSGREGLVDTAVKTAETGYMSRRLMKSLEDLSTQYD DTVRTSGGGIVQFQFGADGLDPLDMEGNAVPVNFKRTWTQAETLTWDNEERSLLPFEVTG QCTEHLATFKAKFSRFGLRNGEPLGYDDASDYGVDEHDGGREFLAAVNKFIGEKASHMAK ARTKAGLHDFVQDPKVTGILYDENDENDESRAYVNQVAKVSKTTLKKFCELCLEKYSRAK VEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMNLTAGVPRIKEIINASKTIATPFVK CPLLNDKDLDVARLVKARMEKTYLHEVLHFAEDMWSARSAVICLAVDTEYLVNRQIEVTV ENIATTILKNKKLKVKSEDLNVKGKCIFIRVTHDGSAPTTARGTAAKGKPTLDEGGSDLL LRVHHLKRAIPELAISGYPEATRAIINTSEHEKPEYTVVVEGYGLRACIGTEGVDGTKVK SNSVMEMRDVLGIEAARYTIANEIATVMADMDIDPRHMQLLADVMTYKGEVLGITRFGLS KMRDSVLQLASFEKTPDHLFDAAAGMKTDRIEGVSTGAFKVVRQLDLTPDHLKVKPTLFE DAWKVDQRERVKLKRSIHG NT seq 4380 nt NT seq  +upstreamnt  +downstreamnt atgccgatgatgtccagcggcgagtcgatcaaggcgcaagtcgtcgacaagattccgaag cgtttcaaagagttaaaatttggtatcctgtcaaaccaagacattgtcaaccaaggcgtc atagaggtctcgaataaaacgttgtacaatgtcgataatggccgaactcccattccacat ggccctctggatccaagattgggtacttccagcaaagccggacgttgcgaaacttgtgac aaaggtctgcaagattgcaatggtcattttggccatgtcagattaccgcttccagctttc catattgggtatttgaaattgattataatgattctacagaacatctgcaagacatgcgcc agggttctacttaccgatgccgagcgacgacagttcctaagagagttacgaaagccaggt attgataatttgaagcgcacacaaatctgtaagaagatcaacgaacaatgtcgaaaggca agccagtgccctcactgcgatgctaccaatggtcaaattaggaaagtcagtgtcgttcgt ctggcacacgataagtacacaaaatacaacaagtctactgcagctaagaaggtggctcca ccgggaatggccgaataccaaaaatcttttgaagaagcaaagaagaacaatacagagttg gaaaaacacgtgaagaaggtctatgaggatttacacccattgagggtgcttaatttgttc aagctgatcacgccgagcgattgcgaacttctggggatcaatcctgctgagggtcgtccg gagatgtttctatggcagttcgtgccggcacccccaatctgcattcggccatctgttgcg caagatggagggagtaatgaggatgatctcaccgcgaaacttgccgagattgttaacatg agctctctgataagagcggcattacaaaaaggacaagcagtgcaaacaatcatggagcaa tgggactttcttcaattacaaatcgccatgtatgttaatagcgacgttccaggccttcag caacctgggtttggaaaggccattcgaggattttgtcaacggttgaaggggaagcaaggt cgattccgaggtaacttgtctggaaaacgtgttgatttctctggacgaacagttatttct cccgatccgaatcttggcattgatgaagtcgccgttcctattttagtagcaaagaatctc acttatcctgaacgggtccaacgccagaacatcgaaaaattgcgcaagtgcgtcatcaat gggccgaacgtccatccgggtgcgcaacaaatagtcaagaaagattccaaccataagata tccttgaaatttgccaagcgggacaatgaggcaaaatttctcaagataggagacgttgtt gaaagacatcttgaggatggcgatattgttctcttcaaccgtcagccatctctgcacaag ctcagtatcatgagtcattacgcaaaaattcgaccatggcgaacattccgtctgaatgaa tgtgtctgcaatccatacaatgcagatttcgatggtgacgaaatgaaccttcacgtacca caaacagaggaggcgcggaccgaagcgattaatctaatgggagtgaagaacaatctttca actccaaagaatggagaacccatcatttctgctacgcaagattttatcactgcagcttat ttgctatctagtaaagagaacttcttcgatcgcaagacctttaccaatatttgcatgtac atggtcgactcaaatcttcatttgcaacttcctccgccagctattctaaaaccacaagct ctttggactggcaaacaagttttcagtattctcatgcgcccgaacaagcaagataatata cttgtcaatgttgacgcgaaatgtcgagacttcgtaccaaacatggtgccgcccgggtat gcgaatgacatggaagccaatgacggatggctggtaattcggaactcagaagtgatgtgt ggccttatggacaagagcacagttggatctgggaaaaaagactccatcttctatgtcata ttacgtgactatggccccgacgcagctgttgtggctatgaatcgcttgtctaagctttcc gccagatatctcacaaacatggggttctccataggaatcagtgatgtttatccttccgag gaactcaacaagagtaaggccagactaatcgctgctgcttacgcggagtgcgagcagctg attgaaagtttcaagaacaacacattagagaaatctactggtttgagtatggaggagaca cttgaagctaaactttccggcaagctaagtcaagttcgtggcgcagctggaaaagagtgt ctcaggaccttatacgcttcgagctcaccgctagtaatggctaattcaggatcaaagggt tctgcaattaacgttgcgcagatggtggcgctagtagggcaacaaattattggaggttct cgtgtccaagaaggctttcaagatcgaactctcccccatttcccgaagcattctaaacag cctcctgccaaggggttcgtagcaaacagcttcttcactgggctgaccccctatgaattc attttccacgctatgtccggacgtgaaggtttggtagatactgccgtcaaaacggcagaa accggttacatgtcgcgacgactcatgaaatctctagaggatttatcaacacaatatgat gataccgtcagaacttctggtggcggaatcgtccagtttcagtttggtgctgacggactg gatccgttggacatggagggaaatgcagtccctgtcaatttcaagcgaacatggactcaa gcagagactctcacatgggacaatgaagaaaggtcacttctcccttttgaggttacgggg caatgcacggaacacttggcaacatttaaagccaaattttctagatttggacttcgtaac ggtgaaccattaggctacgacgatgcgagcgactacggtgtcgatgagcatgatggtggc cgggagttccttgcggccgttaacaaattcataggtgaaaaagcatcgcacatggctaaa gcgcgaacgaaggctggactgcatgattttgtacaagatccgaaagttacgggtattctt tacgacgaaaatgacgagaatgatgaatcgagagcctatgtgaaccaagttgccaaggtt tccaaaaccacattgaaaaagttttgtgagctctgcctggaaaagtactcgcgagccaag gtcgaaccgggtcatgccgtcggagctgttggagcgcaatcgattggagaacctggaaca caaatgacgttgaaaactttccattttgccggtgtcgctggtatgaatttgaccgctggt gtaccccgtattaaggaaattatcaacgcttcaaagacgattgctacgccgttcgtcaaa tgccctctgctcaacgataaggacttggatgtagcccggctcgtcaaagctcgtatggag aagacctacttgcatgaagttcttcattttgccgaagatatgtggtcagcgaggtccgca gtaatctgtctggcggtcgacacggagtatttagtgaacaggcagattgaagtaaccgtg gagaatattgccactacaatcttgaagaataagaaactcaaggtcaaaagcgaagatctt aacgtcaaaggaaagtgcattttcatcagggttacccatgatggtagcgctcctaccaca gctcgtgggaccgcggctaagggcaagcctaccctcgatgaaggtggttctgaccttcta ctccgtgtacaccaccttaagcgcgctataccagaattggccatatccggatatccagaa gccaccagagctatcatcaacacatctgaacacgagaagccagagtacacagtcgttgtc gaaggatatggtctccgtgcctgtatcggaaccgaaggtgttgacggcaccaaagtcaag tctaacagtgtcatggaaatgcgtgatgtcttaggtattgaagcagctcgttatacaatc gccaacgaaatcgcaaccgttatggcggatatggacatcgatcctcgtcacatgcaactt cttgctgatgtcatgacatacaagggagaagtcctaggtatcacccgtttcggtctttcg aaaatgagagatagtgtactgcaacttgcatccttcgagaaaaccccggatcatcttttt gatgcggccgcaggcatgaagacggacagaattgagggtgtcagtacgggtgctttcaag gttgttaggcaactagatcttactcccgatcatctgaaggtaaagccaacgcttttcgaa gatgcatggaaggtagatcaaagggagagagtgaaacttaagagatcgatccatggttga

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