Sclerotinia sclerotiorum: SS1G_10790
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Entry
SS1G_10790 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssl03021
]
SS1G_10790
03036 Chromosome and associated proteins [BR:
ssl03036
]
SS1G_10790
Transcription machinery [BR:
ssl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SS1G_10790
Chromosome and associated proteins [BR:
ssl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
SS1G_10790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
HHH_7
Spt6_S1
SPT6_acidic
Tex_central_region
HHH_9
S1
HHH_3
Motif
Other DBs
NCBI-GeneID:
5484340
NCBI-ProteinID:
XP_001588343
UniProt:
A7EZM3
A0A1D9QBE9
LinkDB
All DBs
Position
Unknown
AA seq
1408 aa
AA seq
DB search
MSMRDLIDGDVEVDEEELDEEFDEETGEARSAEPRRQNGGLEDDSSEEEDDDDEEAARAI
REGFIVDEDEEDDDDARSRRRRREKKRRREQREEEGLDDEDLDLIGEANPEWERKTTQQP
KFKRLKRGHRDDNDHDRERGLDQIFSDDEEQDAPLEYERSFARPDHRIDEFADFIEEDEL
EDDERDRLAEEREVARPREKGYVGGAETAGLDKDALDDMEAIFGNGEDYDWALALEDEAE
AAEAGDQNLELKDVFEPSQLAEKLLTDEDNFIRYSDEPERFQLDRKPYKHLQISDEQFKE
EARWITSLIWPKKNFSGDMQAPFTKAISKVLEFFVVDEVEVPYVFQHRKDYLIHARKSKT
RSDPNNPDGPDYEVTADKLLNQDDLWRILELDLKFRALIDKRNVLEKTYDNLKLAASISD
ATFEQMIPNAQTMEELQDIQDYLYFQYSSEIKSLQGSNGEVKEKRAGNKASRFDRIRKSG
AYQLVRAYGITADEIAGNLLLEGRKKYTEDPPLNPIDLADTLTSSDDFTTGEAVLNAARS
LYAEELFMSPKMRQHFRKHHYMGGLVSCARTDKGLKKIDEQHPYYELKYLKNQTFSDIAS
KPEMFLKMLKAEEEGLLEVRVSLQNERDFRRQIFGEFRSDNYSEVADAWNDERQKVLDMA
FTKLERTITKGVKESMRTECQDSILKVCREEYSRKLDQAPYKPKGMVLGTIPRVLALSNG
NGDPGRDAVCWAYVEEDGRVLDHGKFDNLSRDHRAREAFVELVRSKKPDVLGISGFSVET
HKLVLSLKELVQEHSLRGNEFEDENGEERTEPLDIIVVNDEVARLYKDSPRAAVDHPAFA
PLARYCVGLAKYIQNPMKEYAALGKDIVSLSFHPCQQLLPEDKLRRQLETAMVDMVNLCG
VNINEAVNDAYTANLLPFICGLGPRKATAVLKSINANGGVVNTREELVGDPDNNKLPVVG
PRVWNNCASFLYMEYDSANPASDYLDNTRVHPEDYELGRKMAADALELDEEDVKAEVDEG
GPGAIVRKLIKDDEQEKVNDLILEEYADQLERNYNQRKRATLETIRAELLQPYEELRRNF
GILLDDDIFTMLTGETHESLCEGMIVSVNIRVAKDDFIIAKLDSGIEGRVEKDDGSDNPN
ASLHRLFSVGQTAQAKLLDVDRRNFAARLSFRESQMRPYRKRIDRDIGTWDSLQEQKDRE
ELREKDKATGRVQRVVKHPLFRPFNATQAEEYLGSQAPGDAVIRPSSKGNDHLAVTWKVA
DGVYQHLDVLELQKENEFSVGRQLRIGNKYNYSDLDELIVDHVKAMSKKVEEMMLHEKFQ
KGSRADTERWLTTYTEANPKRSVYAFCLDTRHPGYFHLCFKAGQQARVNSWAVRVVPNAF
ELLKSPYPDMKALCNGFKLRHAAEMNRR
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgcgcgatctgattgacggtgacgtcgaggttgatgaagaggaacttgatgag
gaatttgatgaggagactggcgaagctcgctcagcggagccgcgacgacaaaatggaggc
ttggaggatgattcgagtgaagaagaagatgatgatgatgaggaggcagctcgtgcgatt
cgggaaggttttattgtagatgaagatgaagaagacgatgatgacgcgagaagtaggcgt
cgccgcagagaaaagaaacgccggagagagcagcgtgaagaggagggtctggatgacgaa
gatttggatctcatcggagaggcaaatccagaatgggagaggaagactacacagcagcca
aagtttaagcgtcttaagcgtggccaccgagacgataacgaccatgatcgtgagcgcggc
ctggaccaaatcttctctgacgatgaagaacaagacgcacctctcgagtatgagcgttcc
ttcgcacgcccagatcatcgcattgatgaattcgcagactttatcgaggaagacgagctg
gaagatgacgaaagggatagacttgctgaggaaagagaggtggctcgtccaagagagaag
ggttacgttggtggtgcagaaacagcaggtcttgataaggatgctttagatgatatggaa
gctatttttggaaatggtgaggattacgattgggctctcgctttggaagatgaagccgaa
gcagcggaagctggcgaccagaatcttgagctaaaggatgtcttcgaaccttcccagctc
gcagagaagctacttacggacgaggataattttattcgatactctgatgaaccggaacga
ttccagctcgaccgcaagccttacaaacatttacaaattagcgacgaacagttcaaggag
gaagctcgatggatcacaagtctcatttggccgaaaaagaacttcagtggagatatgcaa
gcgccattcaccaaggctatcagcaaagtcttagagttctttgttgtggacgaagttgaa
gttccttacgtgtttcaacaccgaaaggattatctcatccatgccaggaagagcaaaaca
cgatcggatcctaataatccagatggccccgattacgaggtaaccgccgacaagctcttg
aatcaagacgacctctggcgcattttggaactcgacttgaagtttagggcactaatcgac
aagcgaaatgttcttgaaaagacctacgataacctgaagctggccgccagtattagtgat
gcaacctttgagcaaatgataccgaacgctcagaccatggaagagctccaggatattcag
gattacctctatttccagtattcatcagaaatcaagtctttgcaaggttccaatggtgaa
gtcaaagaaaaacgagccgggaacaaagcatcaagattcgatcgtatacgcaagagcggg
gcttaccaacttgtacgagcatatggaatcacggccgatgagattgccggaaatcttcta
ctagaaggccgcaagaaatatacagaggaccctcctttgaacccaattgatcttgccgac
accctgactagctcagatgatttcaccacaggtgaagccgttttgaacgcagcacgaagc
ttatatgccgaggaactttttatgagcccgaagatgcgccagcatttcaggaaacatcat
tacatgggaggacttgtcagctgtgctagaacagataaaggtctgaaaaagattgatgaa
caacacccatactatgaactcaaatacctcaagaatcaaacttttagcgacatcgctagc
aagcctgaaatgttcttaaagatgttgaaagccgaggaagaaggtttgttagaggttcga
gtatctcttcaaaatgagcgggatttccgacgacaaatttttggagaatttagatctgat
aactacagtgaggtcgctgatgcttggaatgacgaaagacaaaaagttctcgacatggca
ttcacgaaactcgaaaggactatcactaaaggagtgaaggaaagcatgcgaacagaatgc
caagattctatccttaaagtttgtcgagaagaatactcaagaaaacttgatcaggcgcca
tacaagccaaaaggcatggttttgggcactattcctcgagttcttgctttgtccaatggc
aacggtgatcccggtcgtgatgctgtatgctgggcgtatgttgaagaagacggtcgagtt
ttggaccacggaaagtttgacaatctctcaagagatcacagagctagagaagcatttgtc
gaattggtacgcagtaagaaacccgatgttctcggaattagcgggttctctgtcgagact
cataagcttgtattaagccttaaagaattggtgcaggaacactctctgcgaggaaatgag
tttgaggatgaaaatggtgaggagcgaactgagcctctggacattattgtcgtgaacgat
gaagtagcccgactatataaagacagcccaagagccgctgttgatcaccctgcatttgca
ccactcgccaggtattgtgttggtttggctaaatatattcaaaatccaatgaaggagtac
gcagcccttgggaaggatattgtttcattatctttccacccatgtcaacagttgttaccc
gaggataagcttcgaagacaactggaaactgcgatggtagatatggtcaacctttgtgga
gtcaatatcaacgaagcggtcaatgacgcctatacagcaaacctcttgcctttcatctgt
ggtcttggtcctcgaaaggctaccgctgtcctaaaatccatcaatgccaatggtggtgtg
gttaacactcgcgaggagctcgttggtgatccagataacaacaagctgcccgtcgtaggt
ccccgagtgtggaataactgtgccagttttctttacatggagtatgacagcgcaaatccc
gcttctgactaccttgacaatactcgtgtgcacccagaggactatgaacttggtaggaaa
atggcagctgatgcactcgagcttgacgaagaggatgtaaaagcagaagtggatgagggc
ggaccaggagctatcgtccgcaagctcatcaaggatgacgagcaggaaaaagtgaacgac
ctaattcttgaagagtacgccgatcaattggagaggaattacaatcaacgcaaacgcgcc
acactcgagaccattcgtgcggaattgttacaaccatatgaagaactgcgacgcaacttt
ggaatactgttggatgatgatattttcaccatgttgaccggagaaactcatgaatcgtta
tgcgaaggcatgatcgtatctgttaacatcagagtggcaaaggatgacttcattatcgct
aagctggattctggcattgaaggccgtgtcgagaaagacgatggttcagataaccccaat
gcctctcttcatcgtttattctctgttggccaaactgctcaagctaaactgctcgacgtt
gaccgacgaaacttcgctgccaggctatcatttcgcgagtcacaaatgcgaccatacagg
aaacgcatcgatcgcgatataggtacctgggactcacttcaagagcaaaaagatagggaa
gagctgcgcgagaaagacaaggccaccggccgcgttcaacgagttgtcaaacaccccctc
tttagaccattcaatgcgacacaagctgaagagtacctcggttcgcaagcccctggcgat
gctgtcattcgtccttcgtccaaaggaaatgatcatttggcagttacgtggaaagttgct
gatggtgtgtaccagcatcttgatgtcttggagctacaaaaggagaatgagttctcagtt
ggacgacagttgagaattggcaacaaatacaactatagtgatctcgatgaattgatcgtg
gatcatgttaaggccatgtccaagaaggttgaagagatgatgctgcatgagaaattccaa
aaaggcagcagggctgacacagagcgttggttgaccacctacactgaggccaaccctaag
cgatctgtatatgccttttgtcttgatacaagacatcctgggtatttccatctttgcttt
aaagctggccaacaagcgcgcgtcaattcatgggccgtacgggtcgttcctaatgctttt
gaattattaaagagtccataccctgatatgaaggctctgtgtaatggattcaaactgcgc
cacgctgcggaaatgaaccggagatga
DBGET
integrated database retrieval system
