Sclerotinia sclerotiorum: SS1G_10967
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Entry
SS1G_10967 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_10967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_10967
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SS1G_10967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_Pom152
Ig-like_POM152
Ig-like_Pom152_9
Ig-like_Pom152_1
Motif
Other DBs
NCBI-GeneID:
5483869
NCBI-ProteinID:
XP_001587727
UniProt:
A7F050
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MNGTPRMRSGFPPTPGSGPGQRNPTGRVTSPLRDLPTASPAATESDAPLIPVELIDAPSQ
RIELSISENSVRPAAILHNSSLIMGRQIINILPEGSATLNPDGLPFCLDSSRPTVKLPMY
FNQTKPVHIELLRFDFDTNANETIELKKRDMKNFRRMEDEPNVYTLDYTVKKPGLYRLHK
IVDQSKLEVQRRMSDTLVVKCPKAVIRSTSSDKCLGDLSDLSIELEGTAPLKIVYGRTIN
DKDRSFHFQSNQPENFVSPLSGATRPSTLISSGNLDVSWGQARKVIIPLNESMTPSGLWL
YSINEIHDATGNVANFTLVGEDGELIYPKNTHMEQSLIVHERPLSRLTGCDSRSPLMVAN
GHTTELPVEYASPGRTPDDTSHTLTYKFSPLDTLTPAGDHGTEVIFEEYSARNAHQSPII
REPGLYTLVGVKSKFCEGEVREPASCLLLNPPEPQLSINAENINDKCAGNSIGLLVDLDL
IGTPPFVVRYNIITKSGLKHESVKVSGLRHQLELKPRDAGHFKYQFTSVDDAVYKNHKLN
SNDLVLEQDVKPPASAYLRRPAGNIDACIEEPVEMNVELSGEPPFTLEYEIVHDGRRRKQ
KVTGIESDIYKIKTDPLITGGEYSLALASVQDKTGCKIFLNGEVKFMVRHQRPRVAFGHL
DGKHKIMTIEGTNIPLPLRLTGQPPWSIKYRNVDDDSGKILEKTAMSTNDAVKVDARGTY
ELLDVFDNQCPGTVDPKASLFEVDWLPRPKIKLVDNSALVLNGEKYVKHEVCEGDIDAVE
INLIGAPPYHVKYQVRHKPEHGSISISNKEFDAGLGLSTVGMDTIKPGLYEYKFSELSDN
LYDHDSKKFSPLIIEQKVNRKPAAHFIKPGQSYKYCKEELAGDEVIPIKLEGIPPFYLEI
DIKHQSSTRPETVKIANIDSNNYDFRIPHRVLSLGIHQVSVRKIRDSRGCQQKTEHGAPH
VQVQVYDVPTIYPLESRTDYCVGERIGYTLSGTPPFEIYYTFENVQRKAKSPNTSFRRIA
EKPGSFIITAISDKASECKAKTEITKVIHEMPSVRISKGKQVEVDIHEGGQAELLFEFWG
VPPFEFTYTRSTNAKKGQKSHVLETRHEISINSALFLH
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaccccaagaatgcgttctggctttccgcctactcctggcagtggccctggc
caaaggaatccaacagggcgagtgacatccccgttacgggatcttcctacggcatcacct
gctgccacagaatccgacgcgccattaatacccgtcgaacttatcgatgctcctagtcag
cgcattgagctctccatttcggagaacagtgttcgacctgccgccattttacacaactca
tctttgattatgggtcgacaaattatcaatatattgccagagggatctgcgacactgaac
cctgatggtcttccattctgtttagatagtagtcgccctaccgtcaagctccccatgtac
ttcaaccagaccaagcctgtacacattgaactactgcgctttgactttgacacaaatgca
aacgaaacgattgagttgaagaaacgggacatgaagaactttcgaaggatggaggatgag
ccaaatgtttacactctcgactatactgtgaagaaaccgggattatacagacttcacaag
attgtagatcagtcaaagctcgaagtacagcgaagaatgtccgacacacttgttgtgaaa
tgtcccaaagcggttattaggtctacgagttcggacaagtgtctaggggacctttctgac
ctctccatcgaacttgaggggaccgccccattaaagattgtgtatggacgtactatcaac
gacaaagatcgcagtttccacttccaaagtaaccaacctgagaattttgtttcgccgctt
tcgggtgcaactcggcctagcacattaatctcctcggggaatctggatgtttcatggggg
caggcaagaaaagtcattatcccattaaatgaatctatgacccctagcgggctgtggtta
tactcaatcaacgagattcatgacgctaccgggaatgttgcaaacttcacacttgttggt
gaagatggggagctcatctatcctaaaaatacacacatggagcagagcctcatagtccat
gagagacctctttcaaggctcacgggctgtgattctaggagtccgctaatggttgccaat
ggccatacaacagagcttccagttgaatatgcatcgcctggccgaacaccagatgatacc
tcccacaccttgacgtacaaattctcgcctcttgacaccttgacacctgcgggcgaccac
ggtactgaggtgatttttgaggaatattctgcacgcaatgcccatcaatcgccaatcatt
cgcgaaccaggtctttacactctcgttggtgtcaaaagcaaattctgtgaaggtgaagta
agagagcctgcttcttgcttgctcctcaacccacctgagccgcagctgtctataaatgct
gagaatatcaacgataaatgtgctggcaactccataggactactcgtcgaccttgatcta
attggtaccccaccattcgtcgtaaggtacaacataattacaaagagcggccttaagcat
gaatcagtgaaagtatctggcttacggcaccaactggagcttaaaccccgcgacgcgggc
catttcaaataccaatttacctctgtggatgacgctgtttacaagaaccataaattgaat
agcaatgatctagtgctggagcaagatgtcaagccaccagcttcagcttatcttagacga
cccgccggtaatatcgacgcttgtattgaggagcctgtcgagatgaatgttgagctttct
ggcgagccaccttttacattagaatacgagattgtccatgacggtagacgtcgaaagcaa
aaggtcactggaattgaaagtgacatatacaagatcaagacggatcctttgatcactggt
ggcgagtattctctcgcacttgcaagcgtccaagacaagacgggctgcaagatattcctt
aatggtgaggtcaaattcatggtcagacaccaaagaccacgagtcgcttttggtcatctg
gacggaaagcacaagattatgactatcgagggcaccaatattccgctacctttgcgcttg
actggccagcctccttggagcatcaagtatcgaaatgtggatgatgattctggcaagatc
ttggagaaaacagccatgtcaaccaacgatgcggttaaggttgatgctcgtggtacttac
gaattacttgatgtgttcgacaaccagtgccctggaacagtcgatcccaaggcgtccttg
tttgaggttgattggctccccagaccgaaaattaagcttgtggataattcggctcttgta
ttgaatggggagaaatatgtcaagcatgaagtatgcgaaggtgatatcgacgcagtggag
atcaaccttattggtgctcccccttatcacgtcaaatatcaagttcgtcataaaccggag
catggctcgatatctatcagtaacaaagagttcgatgcaggccttggactttcgactgtt
ggcatggacacaattaagcctggcctttacgagtataaattctccgagctttctgacaat
ctatatgaccatgactcgaagaagttctcgccgctcattattgagcaaaaggtcaacagg
aaaccggctgcacatttcataaaaccaggacagtcctacaagtattgcaaggaagagctc
gccggagatgaagtcattcctatcaaattagaaggcatccctcccttttacctggagatt
gatatcaaacaccaaagcagtaccagacccgaaactgtcaaaattgccaatatagattct
aacaattatgatttccggatacctcatcgagttttatctctgggcatccatcaagtcagt
gtacgaaaaattcgcgattccagaggctgtcagcaaaaaaccgaacatggtgctcctcac
gtacaagtacaagtttacgacgtacctaccatctatcctctggaatctcgtacagattat
tgtgtaggagaacggattgggtatacattatcgggtacacccccattcgagatctactat
acattcgagaacgtgcaaaggaaagcaaaatcaccaaatactagtttcaggcgtattgcc
gagaagccaggcagtttcattatcaccgctatctcggataaggctagcgagtgtaaagca
aagactgagattacgaaggttatccatgaaatgcccagtgtcagaattagtaaaggaaag
caagtagaagttgatattcatgagggtgggcaagccgaacttctatttgagttctggggt
gtgccgccttttgagtttacatatacaagaagtacgaatgcgaagaagggtcagaagtca
catgtgctagagaccaggcatgagatctcgatcaattctgctctttttctacactaa
DBGET
integrated database retrieval system
