Sclerotinia sclerotiorum: SS1G_11130
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Entry
SS1G_11130 CDS
T01071
Name
(RefSeq) conserved hypothetical protein
KO
K05236
coatomer subunit alpha
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_11130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssl04147
]
SS1G_11130
Membrane trafficking [BR:
ssl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
SS1G_11130
Exosome [BR:
ssl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SS1G_11130
Exosomal proteins of bladder cancer cells
SS1G_11130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
TPR_COPA_B
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_RFWD3
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
TPR_IFT80_172
Motif
Other DBs
NCBI-GeneID:
5483923
NCBI-ProteinID:
XP_001587889
UniProt:
A0A1D9QGH1
A7F0L2
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MASNSNSSPTMLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEH
DGPVRGIDFHKTQPLFVSGGDDYKIKVWSLQTRRCLFTLNGHLDYVRTVFFHHELPWIIS
SSDDQTIRIWNWQNRSLICTMTGHNHYTMCAQFHPKDDLVVSASLDQSVRVWDISGLRKK
HSAPTSMTFEDQMSRGNQAQADMFGNTDAVVKFVLEGHDRGVNWVAFHPTLPLIVSAGDD
RLVKLWRMSETKAWEVDTCRGHFQNASGCLFHPHQDLILSVGEDKTIRVWDLNKRTSVQS
FKRENDRFWVIAAHPEINLFAAGHDNGVMVFKLERERPASAFYQNNLFYITKDKHVKSYD
FQKNLESPTLLTLKKLGSPWVPPRSLSYNPAERAVLVTSPADGGSYELINLPRDGASSMD
SNDTKRGQGTSAVFVARNRFAVFNATTQQIDIKDLSNSTTKTIKPPNGTIDIYFGGTGNL
LLITPTAVHLYDIQQKKATAELAVSGVKYVVWSNDGLYAALLSKHNVTIVTKSLEQVSSL
HETIRIKSATWDDAGVLLYSTLNHIKYTLLNGDNGIVRTLDQTVYLVRVKARTMYCLDRS
AKPKILNIDPTEYRFKLALVKRNYEEMLQIIKNSSLVGQSIISYLQKKGYPEIALQFVQD
PQTRFELAIECGNLEVAVEMAKQLDRPKLWSRLTAEALAHGNHQIVEMTYQKLRQFDKLS
FLYLATGDEAKLTRMAKIAEHRGDFTARFQNALYLGDVQDRIQMFKEIDLYPLAYMTAKS
HGLAEECESILEASGLTEEQITLPSLGSPLTPPKPVIPTFKANWPTKATSQSFFEKALLG
QVEGLSLEDEPSAAANGFGFDEAGDDETKTGALIEADDDEDAAGWDMGDDIVPEVESDFV
NVDSAEAGAGSSEADLWARNSPIAADHVAGGSFETAMQLLNRQLGAVNFEPLKPRFLEIY
QASKTYLPASASLPPLVNYVRRTVDETDPRKVLPVIPRDIESLATVDLQKGYDAMRQNKL
EDGATIFKGILHALLVNAVSTASEVSEAKKLITTASEYSIAMAIEISRRKIGTADEISKS
PEKLKRSLELSAYFTIPKLEVVHRQLALTSAMKLAYSSKNYNSALSFANRMLANGGSAKV
LDNARKIKAACERNPNDTHEIEFDQFAEFDVCAASHTPIYSGSPFEVCAFDGSKYQAKYK
GTVCAVCGVCEVGKNGSGLKLVA
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaattccaattcctcccctacaatgttgacgaagtttgagtcaaaatcatcc
agagcaaagggcattgctttccatcctaaacggccatggatcttagtttctttacattct
tcgactattcagctatgggattaccgtatgggaacattgattgatcgattcgaggagcat
gatggtccagttcgaggaattgacttccacaaaacacaacccctctttgtctctggtgga
gatgattacaagatcaaggtctggtcattgcagacaaggagatgtctttttaccttgaat
ggacatttggattatgttcgcacagttttctttcatcacgagctcccttggatcatttcc
agttcggatgatcaaactattagaatatggaactggcaaaatcgctctttaatttgcaca
atgactggtcacaatcattatacaatgtgcgctcaattccatccaaaagacgatttggta
gtgtctgcatcccttgatcagtcggttcgagtttgggatatttcaggcttgcgaaagaag
cattcggcgccaacatccatgactttcgaggatcagatgtcgagagggaaccaggctcaa
gcggatatgtttggaaataccgatgctgtagtcaaatttgtgcttgaaggtcatgaccga
ggtgtcaattgggtagctttccatccaacgttacccctgatcgtttctgcgggtgatgat
cgactcgtgaaattatggcgaatgagcgaaactaaagcttgggaggtcgatacctgtcgg
ggacatttccaaaatgcgtcaggatgcttatttcaccctcatcaagacctgatcttgtca
gttggcgaagacaaaaccatccgagtttgggatctcaacaagcgtacatcagtgcaatca
ttcaagcgagagaatgataggttttgggtcattgctgctcatcctgagataaatcttttt
gccgctggtcacgataatggtgtcatggtatttaagcttgagcgagaacgcccagcttct
gccttttatcaaaacaatctcttttatatcaccaaggataaacatgtcaaatcttatgat
tttcagaagaacctcgagagcccaacactattaacattgaagaaactcggtagcccttgg
gttccacctagatcactctcctacaatccagctgaacgagctgtcttggttacttctcct
gcagatggtggttcatacgagctcatcaatcttcctcgggatggagctagttcaatggac
tcaaatgacacgaagcgaggtcaaggtacttctgcagtttttgtagcacgaaacagattc
gctgtgttcaatgctacaactcagcaaattgatatcaaagatctttccaactctactacc
aagaccattaagcctccaaatggaaccatcgatatctactttggtggaactggtaacctt
ttgttgatcacccccactgctgttcatttatatgatatccaacaaaagaaagctactgcc
gaacttgctgtatccggtgtcaagtatgtcgtttggtccaacgatggtttgtacgcggct
cttttgagcaaacataacgtcacgattgttacgaaatctttagaacaagttagctccctt
cacgaaaccatccgtattaaaagtgctacttgggatgatgcaggcgtccttctttactcg
actttgaaccacatcaaatacaccttattgaacggagataatggtatcgttcgcacgctt
gatcagacagtctaccttgtcagggttaaagcacgtactatgtactgcttggaccgaagt
gccaaaccaaagattttgaatatcgaccctacagagtatcgtttcaagcttgcccttgtg
aagcgaaattatgaggagatgttgcaaatcattaagaactccagtcttgttggtcaaagt
attatctcttatttgcaaaagaagggttatccagaaatcgctttgcaattcgttcaagat
ccacaaactcgatttgaattagcaatcgagtgtggtaacttggaagtcgccgtggagatg
gccaagcaattagatcgaccaaagttgtggtcgagattaactgcggaagcccttgctcat
ggtaatcaccaaatcgttgagatgacataccagaagttacgacaatttgacaaattatcg
ttcctgtatcttgccactggagacgaggcaaagttaacaagaatggccaaaattgcagaa
catcgtggtgacttcaccgcccgcttccaaaacgcattatatctcggagatgttcaagac
aggatacaaatgttcaaggaaattgatctttacccacttgcttacatgaccgcaaagtca
catggacttgcagaggaatgcgagtccattcttgaggcttcaggtcttaccgaagaacaa
atcactttaccatccctcggatctccacttactcctcctaaacctgtcatccctacattc
aaggcaaactggccaacaaaggcaacttcgcaatcattctttgagaaggctctgcttggt
caagtcgaaggtctttctctagaagatgaaccttctgctgctgcaaatgggttcgggttt
gatgaagctggagacgatgaaactaagactggcgctcttattgaggctgacgatgacgaa
gatgctgccggatgggacatgggtgatgatatcgttccagaagttgagagtgacttcgtc
aatgttgatagtgcagaagctggcgcgggtagtagtgaggctgatttatgggctcgcaat
tcccctatcgctgctgaccacgtggctggtggttccttcgaaactgctatgcaattactt
aaccgtcaactcggcgctgtcaactttgaacctttgaaacctcgattcttggagatttac
caagcatcaaaaacatacctcccagcatcagcaagccttccacctttagtcaattatgtt
cgacgaacagttgacgagacagatcctcgtaaagttcttcctgttattccacgagatatc
gaatcattagcaaccgtcgacctacagaaaggatatgatgccatgcgacaaaacaagctt
gaagatggcgctacaatattcaagggcatccttcatgctctacttgtcaacgcggtctca
actgcatcggaagtatccgaggcaaagaaacttatcactacagcatcagaatacagtata
gcaatggccattgaaatttcaaggcggaagattggaactgctgatgaaatatcaaaatct
ccagagaaactgaagcgcagtttggaattgtcagcttatttcactattcctaagttggag
gttgttcatagacaattggctttaacaagtgcgatgaagttggcctactctagcaagaac
tataattccgcattaagttttgcaaacagaatgttggcaaacggcggaagtgctaaggtt
cttgataatgctcgtaagattaaagctgcatgtgagcgcaaccctaatgatacccacgaa
attgaattcgatcaatttgccgaatttgatgtttgtgctgcctcacatacacctatttac
tctggctctccattcgaggtctgtgcattcgatggtagcaaatatcaagctaaatacaag
ggaactgtctgtgcagtatgtggtgtctgtgaagttggtaagaacgggagtgggttgaaa
cttgttgcatag
DBGET
integrated database retrieval system
