KEGG   Sclerotinia sclerotiorum: SS1G_11309
Entry
SS1G_11309        CDS       T01071                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SS1G_11309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssl03019]
    SS1G_11309
   03036 Chromosome and associated proteins [BR:ssl03036]
    SS1G_11309
Enzymes [BR:ssl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SS1G_11309
Messenger RNA biogenesis [BR:ssl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     SS1G_11309
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     SS1G_11309
Chromosome and associated proteins [BR:ssl03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    SS1G_11309
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 NA-iREase2
Other DBs
NCBI-GeneID: 5484089
NCBI-ProteinID: XP_001588066
UniProt: A7F139 A0A1D9QGJ0
LinkDB
Position
Unknown
AA seq 535 aa
MADVLATKLAATKINDDASPDNWKAGLNIPARDTRQQTEDVTATKGLEFEDFSIKRDLLM
GIFESGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALERINPKSSKVQCLI
LVPTRELALQTSQVCKTLGQHLGVNVMVTTGGTTLRDDIMRLAEPVHIIVGTPGRILDLA
GKNVADLSECNMFIMDEADKLLSPEFTIVIEQLLQFHPKDRQIMLFSATFPMTVKDFSDK
NMADPYEINLMDELTLRGITQFYAFVEEKEKVHCLNTLFSKLQINQSIIFCNSTNRVELL
AKKITELGYSCFYSHARMIQANRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFD
FPKNAETYLHRIGRSGRFGHLGLAINLISWEDRFNLYNIEQELGTEIAPIPAIIPRNLYV
YETPENIPRPVSNFQTNTRQPSGRDQQQPTQHSGNQRSSGQFNNFNNGRQNGSGQNQNQG
QGQGQGQGPRQNQGQRQSYPRGRGGFGGGRGGGQGPRQNGFDNPRGGRGQGPPAQ
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggctgatgtgctggcaacaaagctggccgctactaagatcaatgatgacgcttcccca
gacaactggaaagctggtctaaacatcccagcgagagatacgaggcagcagaccgaggat
gttactgccaccaaaggcctcgagtttgaagatttctccatcaagcgagatctattaatg
ggcatattcgaatcgggtttcgaaaagccgtcaccaattcaagaagaggcaatccctgta
gctcttacaggacgggacatactggctagagcgaagaatggtactggtaaaactgccgcc
ttcgtcattcccgcactcgaacgtatcaacccgaaaagcagcaaggtgcaatgtctcatc
ttggtacctactcgagaactcgccctccaaacatcacaagtctgcaaaactcttggtcaa
cacctaggcgtcaacgttatggttactaccggtggtacgaccctacgagatgatatcatg
cgtctcgcagaacctgttcatatcattgtcggcacaccaggtagaattctcgacttggca
gggaagaatgtagcagatctcagtgaatgcaatatgtttatcatggatgaagctgataaa
ctcctctcacccgaatttactatcgttattgaacagcttctacaattccaccccaaggac
cgacagattatgctcttcagcgcaacctttcccatgaccgtcaaagacttctcagataag
aacatggccgacccttatgaaatcaatcttatggatgaacttactctacgtggtattact
cagttttatgcttttgtcgaagaaaaagagaaagttcattgcctcaacactttattctcc
aaactacagatcaatcaatcaatcatcttttgcaactctacaaatcgtgtcgaacttctt
gccaagaaaattacagaattaggctattcatgtttctacagtcatgcgcgcatgattcaa
gctaatcgaaaccgtgtattccacgactttcgaaatggtgtctgccgcaatcttgtttgt
tctgaccttttgacccgtggtatcgatattcaagcagtaaacgttgtcatcaacttcgat
ttccctaagaatgccgaaacttatcttcatcgtattggtagatcaggccgatttggacat
ctgggtctcgcaatcaacctcatcagttgggaggatcgttttaacttgtacaatatcgag
caggagcttggaacagagatcgcacctattccagcgattattcccagaaatctctatgtc
tacgaaacccccgaaaacattccacgtcctgtttccaattttcaaaccaacacccgtcaa
ccatctggacgtgatcaacaacaacctacacagcactctgggaatcagagatcttctggt
caatttaataattttaataatggacgccagaatggttctggccaaaatcagaatcaagga
caaggacaggggcaaggacaaggaccaagacaaaatcaaggtcagcgtcaaagctatcct
agaggccgaggcggatttggtggtggtagaggaggtggtcaaggaccacgacagaatggc
tttgataaccccagaggaggtcgaggccagggtccaccggctcaatag

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