Sclerotinia sclerotiorum: SS1G_11323
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Entry
SS1G_11323 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_11323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssl03041
]
SS1G_11323
Spliceosome [BR:
ssl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
SS1G_11323
Complex C
U4/U6.U5 tri-SnRNP related factors
SS1G_11323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
5483736
NCBI-ProteinID:
XP_001587331
UniProt:
A0A1D9Q890
A7F153
LinkDB
All DBs
Position
Unknown
AA seq
256 aa
AA seq
DB search
MTTHRADEKRFLDERGNTGPLAPNGLNPTTILEKPVRERIVDCYFWKDQCFALNEADIVS
RVVSHVTFIAGTYGDSQRPSPFLCLAFKLLQLGPSDEILQEYMGYGGEKFKYLRALALFY
WRMTRQAKDVFMVLEGYLDDRRKLRRKTRTGTTLTFMDQFVDDLLTKDRVCGTTLWKMPK
REILEDLEVLEPRISPLGDIEDLLDESEGEVEVVKNGAGSESVDSPGEEFGEEAVEGEKM
DVVASNEASPNGQDSL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgactacccaccgcgccgatgaaaagcgtttcctcgacgaacgtggcaatactggcccg
cttgctcccaacggcctcaatcccaccactatcctcgaaaaacctgttcgcgaacgcatt
gtggattgttatttctggaaagaccaatgtttcgctctcaatgaagccgatatcgtatcg
cgcgttgtttcccatgttacgttcatcgccggcacatacggggattcgcagcggccctcg
ccgtttttatgtctggcctttaaattattacaactagggccaagtgatgagatattacag
gaatacatgggatacgggggagagaagttcaagtatttgagagcactagcattgttttat
tggaggatgacaagacaggctaaagatgtcttcatggtgttggagggttatttggacgat
aggagaaaactgagaagaaagacaaggacggggacaacgctgacgttcatggatcaattc
gtggacgatttgttgacgaaggatagggtgtgtggcacgacgttgtggaagatgccgaag
agggagatactggaggacctagaggtattggaaccgaggatcagtccattgggagatatt
gaggacctgctagatgagagtgagggtgaggtcgaggtggtgaaaaacggtgcgggatcg
gagagtgtggatagtcctggggaggaattcggggaggaagcggtagaaggagagaaaatg
gatgtggtcgcgtcaaatgaagcttctccgaacgggcaagatagtctgtga
DBGET
integrated database retrieval system
