KEGG   Sclerotinia sclerotiorum: SS1G_11362
Entry
SS1G_11362        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SS1G_11362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssl03019]
    SS1G_11362
   03036 Chromosome and associated proteins [BR:ssl03036]
    SS1G_11362
Messenger RNA biogenesis [BR:ssl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SS1G_11362
Chromosome and associated proteins [BR:ssl03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     SS1G_11362
    COMPASS/SET1 complex (yeast)
     SS1G_11362
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WD40_Gbeta WDR55 Beta-prop_WDR75_1st Beta-prop_Aladin CFAP251_N EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_EIPR1 PAC11 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 5483573
NCBI-ProteinID: XP_001587370
UniProt: A7F192
LinkDB
Position
Unknown
AA seq 359 aa
MSSTPMAIDSPIGSNGTSILKANGVSSGPSTAKLTEMISLYTPVKLITSETDNTMQIYDV
LEGRHSKMNISAKYGCNHAMFGHAEHCIIHSSTKKDHKIRYLSAHDNSYIRYFEGHEQNV
TCLSLHPGQDNFISCSEDNTLRIWDAASNNPAGILNLTGVHLVAWDPSGNVFATASPLAQ
SILLYDFRNFDKEPFATFDILPFCQEFSPQAIGRGWNKLAFSNDGKHLLLGTTGNGHFLL
DAFDGHLKAFLRRDRGGARRLGAGDHNPDNLDPSSSEYLHTTAGDCCFTPDGRYVISGSR
GKNVLVWDTLAATKNRVLNPLHELEYAGDSAIVAFNPKYNHFATADQEVLFWVPNTDML
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtcgtctactcctatggcgatagactctccaataggatcaaatgggacctccatattg
aaagcaaatggagtgtcatcaggaccatcaactgccaagcttacggagatgatctctctg
tatactcctgtcaagcttattacatcagaaactgataatactatgcaaatttatgatgtt
ctcgaaggaagacattcaaagatgaacattagtgctaagtacggttgcaaccatgccatg
tttggccatgccgaacactgtataatacattccagtaccaaaaaagaccacaaaatacgt
tacctctcggctcatgataactcctacattcgttacttcgagggccatgaacaaaatgtc
acatgtctatccctccatcctggtcaggacaatttcatttcatgctctgaagataacact
cttcggatatgggatgcagcttccaacaatcctgctggtatcttgaatcttaccggtgtt
catctcgtggcatgggatccatctggaaacgtctttgcaactgcttctccgctagctcaa
tccattttactgtatgatttccgcaacttcgacaaggaaccttttgctacttttgacata
ttaccattttgtcaagagttctccccgcaagcaattggaagagggtggaataaattagct
ttttcgaatgatgggaaacacctactactaggcacgactggcaatggccatttcttacta
gatgcatttgacggacatctgaaagcattcctaaggagggatagaggtggtgccagaaga
ttgggagcaggagaccacaatccggataatttggatccttcatcaagtgaatatctccat
accactgcgggagactgctgttttactcctgatggaagatatgtaattagtggatctcga
ggcaaaaatgtcttggtatgggatacactcgcagctacgaaaaatcgagttctcaatcct
ttgcatgaattggaatacgcaggcgattcggcaattgtagctttcaaccccaagtataac
cattttgctacggcggaccaggaggttttgttttgggtcccgaatacggatatgctctga

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