Sclerotinia sclerotiorum: SS1G_11370
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Entry
SS1G_11370 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
ssl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_11370
03015 mRNA surveillance pathway
SS1G_11370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_11370
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SS1G_11370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_AKAP-17A
RRM_ACIN1
RRM_7
Motif
Other DBs
NCBI-GeneID:
5483550
NCBI-ProteinID:
XP_001587378
UniProt:
A7F1A0
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MPSRTPSPAPRGRSRVSRSRTPYSSASRYSRSRSRSPRRSISPRSRSRSGGRASRSRSVA
GTGRNGGGRYRSESRGRSLSPRGRSRTRSRSRERSESAVAGVRSTKVVIEKLTKNVTEDH
LREIFGSYGEIKDLDVPMNRSFNTNRGTAYILYVSAESAESAIAHMHESQLDGAIINVSI
VLPRRKFSPQPPMARRGVNIDPRIPLGSGRSSRGGFDSRGSGGGTGGGRLVDRDRGGDTY
RPGERTRERSRSPRRHRTRSRSLSSRSLSRSPLPRRDRVRDRRDSFGGRGGRGGRDRDGS
RDGRRRRSPSYSSYSSYDDRSRSRSRGRGGGGGGRGRR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccctcacgaacaccctcacctgctccacggggtcgctcccgagtttcacgttcacga
acaccatattctagcgcatctcgttattcaaggtcgcgcagccgttctcctcgccgttcg
atttctccccgttcgagatctagatcgggaggtagagcgagtcgttctagaagtgtagct
ggtactggtagaaatggaggtggcagatacagaagtgaaagtagggggaggagtttaagt
cctagaggacgaagcagaactcgaagcagaagccgggagagaagtgagagtgccgtcgct
ggcgtgaggagtactaaggttgttattgagaaacttacaaaaaatgttactgaagatcat
cttcgtgaaatatttggtagttatggtgagattaaagatttagatgtacccatgaacaga
agtttcaataccaatcgcggtaccgcttatatcctttacgtttccgcagaatctgccgaa
tccgccatagcacatatgcatgaatcacagctcgatggcgccattataaatgtatcaatt
gttttaccccgccgcaagtttagcccacaaccacccatggctcgtcgtggagtaaatatt
gatccaagaattccgcttggcagtggtaggagttctcgtggtggtttcgattctagaggt
agtggaggtggaacgggaggaggaagactggtggatagggatagaggtggtgatacttat
agacctggcgaaagaactcgtgagagatccagaagcccccggagacacagaacgagaagt
cgaagtttgagtagtcgatcactatcgagatcaccgttaccgaggagagatagagtaaga
gacaggcgagatagttttggaggtcgcggaggcaggggtggaagagatagggatggaagt
agagatggtagaaggaggagaagtcctagttatagtagctatagtagctatgatgacagg
agtcgaagtagaagtcggggtcgtggtggaggtggtggcggaaggggaagacgttaa
DBGET
integrated database retrieval system
