Sclerotinia sclerotiorum: SS1G_11653
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Entry
SS1G_11653 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K09291
nucleoprotein TPR
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_11653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_11653
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SS1G_11653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
CENP-F_leu_zip
DUF4200
Motif
Other DBs
NCBI-GeneID:
5483731
NCBI-ProteinID:
XP_001587660
UniProt:
A7F232
A0A1D9Q8W7
LinkDB
All DBs
Position
Unknown
AA seq
2060 aa
AA seq
DB search
MTAAVLDVDYLSAYLSVPQQTLSTVIDNPTAELVRSVLEAVTAKAREHDELVADKLRVDI
ELENAVRSSETRIEGLRSSVEKAQKTVEELRTKLNEEENSRSSLESELQNLKTSSSTSTS
ELETLRSRISSLESSNRDALAVIESKTTANSALAQDLQKQHQKGLELSQQITALQQSAQN
ANSAVSSAKFREQSLKQEVELAKRNNEWFENELKTKSAEALKYRKEKGARIAELQRQNEE
STSNVESLRRTEQALRTRLDEVQKKAEDSLHKIQQLQEAAAKTEEGFRQELESARRLAEL
QAQQTETHRQRLKEVEAGIEKMKDDAAEEIGRCQQEVEAERQEREQAEHRISELEAEIDR
LEALVSSQPRPGSVPSTPQRGLNGSVFGRSGSPAQFGTPGSMRSKSSITATQAIDELYKV
KGLLATEKRRSERLAAEMEEMMQGLEAKQPELEEMQAEHERLQQEVVEMSKFVDQTGKER
DRAKKDVRKAESEASTAKAEVNILRQQLRDLSAQIKMLLCDLDARERGLETLNASERAQM
ERLARGEVSEDSFEGMTDTDRFISQRLTVFRSISELQEKNQELLKITRELGQKMESEEAQ
AAKNQAVQDHEEVQKLQAKVEDLKDELRSMITRSESYIKERDMFRRMLQHRGQLPANSDL
ASMFGQSVDGNGVMSTIENPNQKDNANYAALLRELQGHFDQYREEQTVDRRTLREQTERL
SSEKAALQAEISKVSSQLTLANERYEMLHSNYILLQSENSELQKRSQILSEAAAKQDLKT
QQVAEDLIEAKGLVESMRNETANLKAEKKLWKDIQDRLSQDNENLTNERSRLNTLIANQQ
TLQNERELSESETRRRLQAQVESLESELNTTKRKLNDEVEESKKAQLRKEYDTQQTQKRI
DELAASLSQAREELVAAQTSRDHLQARVDELHIELKSAEERVELLQPRPTPRPGTNTQNT
VGQDTAAEDESLSREQELGIELSELKRDLELAKSELENAKQQVEQFKAISQSSEEELQSL
NATLDECREEMDRIIEEKDAKIRELEQRAEDISAELTNSNNELTALRNQQGEVARQAEEE
KSGLEAEIVRLKDEQEKHAVAAKFHQEDLRAQAAIATKAQQDYEHELVKHAEAAKHLQSL
RVEYNQLKSESATLKAEAESAKVALSQSEASWSERREQFERELNELRTRRDDVNAQNKLL
HQQLDNVSSQIIALQQTRSAGPDASEAGSPAADGTTDRTVEGLRELNIYLRREKEIGEVQ
YDIKIQEAKRLQQQLEYTQAQLDEARLKLDQERRSHADGGKTSIAHKDLMDKLNELNLFR
ESSITLRNEARQAQSQLADKTKRVEELLAQIQPLETKVRELEHSKETMEGEMHLLQEDRD
RWQKRNQDILSKYNRIDPAEMEQMKEAIETLRSERDALLEEQQPLREKVQTLESSMENDR
AQWQTTRQKLIEQAKERNRTLTKDKNDRAAERDVAISERDSLQEQLTSLQEQLQTAIEEK
EAAEAKLAEVQQELEEVKTQRDQALANAVQSVASPKTPSAPPATASESNEVVNAQLVELR
KERDQAILEKQALEQQITELKQQLETANSERDGAIADAAEARSQQKAQPSDTAMDDGAEE
GQIDESHNGISDEERNALEARIAVAEAMAKERDEKAKEIEESMEATLKQRSDKMKAALNK
KLGESKEAVRVQLEADFKLKLEQEKQIWLAENKTADSSAPPPTPSAPKTEENAIPVTPAT
PSKVAAPSADGSDLSDEQVRHLLSTNPTVKSILTNNLKKLLEKETQKLKLEQDKLVAEKL
AEAQKKSEATLTEAQAKADHTQAQAVLMAEKKSSLKLNMFDNRIKMATAKIAVVEKAAKD
TPEKPVGEVWEIAKNAKPPPAAPVVPVLTTSTPAPAAQAAQSPAVNTTSAAMPSANVPVT
QSDSAPAEDIKPEDTEAPKSGIPSGPRPITPSTNGASSLPVSNIPSAPQAGNQSRLPQMR
GGNQNRGGGGVGGGGARGGIYQPRGGAAGRGRGNLSGQRGGMNATPQSFSPNAQPGQKRP
VPEGGQQGSGGKRPRGGGSN
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcggtactcgatgtcgactacttgtcggcatatttgagcgtgccgcaacaa
actctaagcacagttattgataaccctactgccgaattagttcgaagtgtccttgaagct
gttactgcaaaagcacgcgagcatgatgaattggtggcggataaattgcgagttgatatc
gagcttgagaatgctgtgagaagttcagagacgcgcattgaaggacttcgatcgagtgtg
gaaaaggcgcagaaaaccgtggaagagctgaggacgaagctcaatgaggaggaaaattca
agatcatctcttgaaagcgaacttcaaaacctgaagaccagttcctcgacatcgacatct
gagctagaaactttaaggtctcgaatctcatcactcgaatcctccaatcgcgatgcactg
gctgttatcgagtcaaagacgactgctaacagtgctctcgcacaagatctacagaagcaa
caccagaagggattggaacttagtcaacaaatcacagctttacaacaatccgctcaaaat
gcaaattctgcggtatccagtgctaaattccgagagcaatctctgaagcaagaagtcgag
ctagccaagcgcaataatgaatggtttgagaatgaattgaagactaaaagcgccgaggcc
ttgaagtatcgcaaagagaagggtgcacgaattgcagagttacagcgtcaaaatgaagag
tccacttccaatgtcgagtctttacgacgtaccgagcaagctttacgaactaggttggat
gaggttcagaagaaggccgaggattcacttcacaagatacaacaacttcaagaagcagct
gcaaagactgaagaaggtttccgccaggagttagaaagcgcgcgtcgtctcgctgaattg
caagcacaacaaaccgagacacatcgacagagattgaaggaggtcgaagcaggaatagaa
aagatgaaggatgatgccgcagaggagattggtaggtgtcagcaagaagttgaggcggag
agacaggaacgagaacaggcggagcatcgtatttcagagcttgaagccgagattgatcga
cttgaggctcttgtatcatcacaacctcgccctggctcagtaccatcaaccccacaacga
ggacttaatggttcagtgtttggaagatctggttcacctgctcaatttggtacacctgga
tctatgcgcagcaagtcttctattaccgctactcaagctatcgatgagctctataaagtc
aagggtctattggctacagaaaagagaagaagtgaacgacttgcggctgagatggaggaa
atgatgcaaggactcgaagcaaaacaacctgagttagaagaaatgcaagccgagcatgaa
cgtcttcaacaggaggtggtagagatgtcaaagtttgtcgatcaaactggcaaggagcgc
gatcgtgcgaagaaggatgttaggaaagctgaaagtgaggcatctaccgcaaaagcggag
gtgaacatccttcgacaacaactcagagatcttagcgctcaaatcaagatgcttctttgc
gatttagatgcgagagaaagaggattagagactttgaatgctagcgagcgagcacaaatg
gagcgtctagcacgaggagaggttagcgaagattcatttgaaggaatgactgatacggat
cgatttatcagtcagagactcactgtcttccgcagcattagtgaattgcaagagaaaaat
caggagttgctcaagatcacgagagaactgggtcagaagatggaaagcgaagaagctcaa
gctgccaagaatcaagcagttcaagatcatgaagaggtacaaaaacttcaagccaaggtt
gaagatttgaaggatgagttgagatctatgatcactcgttcagaaagctatatcaaggaa
agagacatgttccgtcgtatgcttcaacaccgaggacaacttccagccaattccgatctc
gcatctatgtttggtcaatcggtcgatggcaatggtgtcatgtcgactattgaaaatcca
aaccaaaaggacaatgctaattatgccgcattgttacgcgagttgcaaggccactttgat
cagtatcgcgaagaacaaactgttgatcgacgcacactaagagagcaaacagaacgactt
tcatcggagaaggctgcacttcaagcagagatttccaaggttagcagtcaattgacactt
gctaatgagcgctacgaaatgttacactccaactacatattgttgcagagtgaaaatagc
gagttacagaaacgttctcaaatcctttccgaggccgctgctaagcaagacttgaagaca
cagcaagtagctgaagacctgattgaagcaaagggattggtggagagtatgagaaatgag
actgctaatctcaaggctgagaagaagctttggaaggatatccaggatcgcctcagtcag
gacaacgaaaatctcaccaacgaacgcagtagactcaacaccctcatcgcgaatcaacaa
actctccaaaatgaacgcgagttatccgagtccgaaactagaagaagacttcaagcccaa
gtagaatctttggaatctgagttgaacaccacaaagcgaaagcttaatgatgaagttgaa
gagagcaagaaagctcaattgagaaaggagtacgatactcagcaaactcaaaagaggatt
gatgagcttgcagcgagtctgagccaagcaagggaagagcttgttgctgcgcagacatcg
cgcgatcatctccaagctcgcgtagatgagttacacattgagcttaagagtgcagaggaa
cgagttgagttgttgcagccaagaccaaccccacggccaggcaccaatactcaaaatacc
gttggacaagatacagctgctgaagatgaatctctaagtcgtgaacaggaattaggaatc
gagctttctgaattgaagagggatttagaactggcaaaatcagagctcgaaaatgcaaag
caacaagtagaacaattcaaagctatcagtcaatcgtctgaggaggagttacagagtctc
aatgcgacactggatgaatgccgtgaggagatggataggatcatcgaggagaaggatgcg
aagattcgcgagcttgagcaacgagccgaagatatttctgccgagctcactaattctaat
aatgagttgacagcccttcgaaaccaacaaggtgaagtagctagacaagctgaggaggag
aaatccggactcgaggcagagattgtacgtttgaaggatgagcaggagaaacatgctgtg
gctgcaaaattccatcaagaagaccttcgcgcacaagcagcaatcgccaccaaagcccag
caagactatgagcatgagcttgtcaagcatgcagaagctgctaaacatcttcaatctcta
cgagttgaatataatcaactcaaatccgaatcagcaacattgaaagcggaggccgaatct
gccaaggttgctttgagtcagagcgaagcctcttggagtgaacgacgtgagcagttcgaa
cgagagttgaatgagttgaggactaggcgagatgatgttaatgcacagaacaagcttcta
caccaacagctagataatgtttcttcacaaatcattgcattacaacagacacgctccgct
ggaccggatgcatcagaagctggatccccagctgcggatggaaccacagatcgcactgtg
gaaggtttgagagagctgaacatatatctgagacgcgaaaaggagatcggtgaggttcaa
tatgatatcaagattcaagaagccaaacgactacaacaacaacttgaatacactcaagct
caactcgatgaggctaggttaaagcttgatcaggaacgacgctctcatgccgatggtggt
aaaacctcgattgcacacaaggacctcatggataaacttaatgagctcaatcttttccgt
gaaagcagcatcaccttacgtaatgaggcacgtcaagctcaatctcaacttgctgataag
accaaacgtgtcgaggaacttttggctcaaattcaaccactggagacaaaggttcgtgaa
ttagaacatagcaaggaaaccatggagggtgaaatgcatctattgcaggaagatcgagat
cgttggcagaaacgtaaccaagatatactttccaagtacaatcgaatcgaccctgctgaa
atggaacaaatgaaggaagccattgaaactttgcgaagtgagagagatgccttgttagaa
gaacaacaaccattgcgggagaaggtacaaactttggagagctctatggagaatgacaga
gcacaatggcaaactacccgacagaagttaattgagcaggccaaggagagaaatcgcact
ttaaccaaggataagaatgaccgagctgcagagagagatgtggccatttccgagagggat
tcacttcaagaacaactcacttcacttcaagagcaacttcaaactgccattgaagaaaag
gaagcagcggaagccaaacttgctgaagtacaacaagaattggaagaagttaagactcag
cgtgatcaagcattggcgaacgctgttcaatctgttgcatctcccaaaactccatccgca
cctccagcaactgcttcggagagtaatgaagttgtcaatgcacagcttgttgaacttcgt
aaggagcgtgatcaggcaatcttggagaagcaagctcttgaacaacaaattacagaactc
aaacaacagctcgaaacggccaattctgagcgagacggtgctattgccgacgccgctgaa
gcacgatcacaacaaaaggctcagccatctgatactgcgatggacgatggtgctgaagaa
ggacagatcgacgaaagtcataatggtatctcagacgaggagagaaacgcactggaggca
cgtatagctgttgctgaagcaatggctaaggagcgtgatgaaaaagctaaggagattgaa
gagtctatggaagctacactaaaacaacgttccgataagatgaaggcagctttgaacaag
aaactcggcgaatccaaggaagctgttagggtacaactcgaggctgatttcaaattgaaa
cttgagcaagagaaacaaatctggcttgcagagaataagactgctgattcttcagcccca
ccaccgacaccatctgcacccaagacagaagaaaatgccattccagtcacccccgccact
ccaagtaaagtcgctgcaccatcggctgatggctcggatctttcggatgagcaagttcga
caccttttatcgacaaaccccacagtcaagagtattcttaccaacaacttgaaaaagctt
cttgaaaaagaaacgcaaaaactcaagttggagcaagataaactcgtggcagaaaagcta
gctgaagcgcaaaagaaatctgaagctactttgactgaagctcaagcaaaggctgaccac
acacaggctcaagctgttttgatggcggagaaaaagtcctcattgaaactcaacatgttt
gacaatagaatcaaaatggccactgcaaagattgcagttgttgagaaagccgcaaaggat
acaccagaaaagcctgttggtgaagtgtgggagattgctaagaatgcaaaacctcctcct
gcagcaccagttgtaccagttcttacaacgtcgacgcctgcccccgctgctcaggcggct
caatctccagcggtaaatactacatcagctgcaatgccatccgcgaatgttcccgttaca
caatctgatagcgctcccgctgaagatattaagcccgaggatactgaagctccaaagagt
ggtataccttcaggaccacgtccaataactccatcgacaaacggggcctcttcattacct
gtcagtaatattccttctgcccctcaagcaggaaaccagtcgcgactaccacaaatgcgt
ggtggtaatcaaaatcgtggaggcggaggtgtcggaggtggtggtgctcgtggaggaatt
tatcaaccacgtggaggagcagcaggtagaggaagaggtaatctcagtggacaacgtggt
ggaatgaacgctactcctcaaagttttagtccgaatgcacagcctggacaaaagagacct
gtaccagaaggtggtcagcagggaagcggaggaaaacgccctaggggaggaggaagtaat
tag
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integrated database retrieval system