Sclerotinia sclerotiorum: SS1G_11798
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Entry
SS1G_11798 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SS1G_11798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_11798
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SS1G_11798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_III
AAA_27
Motif
Other DBs
NCBI-GeneID:
5482879
NCBI-ProteinID:
XP_001586769
UniProt:
A7F3F2
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MDQEFRVVAKDLGQEIEKKIFLENNKIHGWCMRLTRTEASCIRNKSKYQECQTLKSGVFF
TTSKLLSLRREFDQLSENYNRTQTSLVHEVVAVAASYCPVIETLASILAHLDVIVSLAHT
SAHAPTSYVRPKMHPRGTGSTILKEARHPCMEMQDDVQFITNDVSLVRDESSFLIITGPN
MGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLE
TANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEYIVKEIGAFIEEGICDQSFGIHV
AELVKFPKKVINMARRKAEELEDFGTSTKVDVDYGDPSSQEFAKEDVEEGSRLLKEVLKK
WKAEIDKNGEMGKEEKIEVLRRLVGGDERLLQNPFFRGIKCL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggagtttcgtgttgtggccaaagatctcggtcaggaaatcgagaagaaaatc
ttcctagagaacaacaaaattcatggctggtgcatgcgacttacacgaaccgaagcctct
tgcattcgaaacaagagcaaataccaagaatgtcaaactctcaaaagtggtgtatttttt
actacttcgaaactcctttccctccgccgcgaattcgaccagctctcagaaaactataac
cgcactcaaaccagtctggtgcatgaagttgtcgctgtagctgcttcctattgtccagtc
attgaaacactcgcctctatcctcgcccacctcgacgtcatcgtctctctagctcacact
tccgctcacgcccctacttcttatgtccgtcctaaaatgcatcctcgtggtacaggttcc
acaatccttaaagaagctcgtcatccttgtatggaaatgcaagatgatgttcaattcatc
accaacgatgtctctctcgttcgtgatgaatcctctttcctaataatcaccggaccgaac
atgggaggcaagtctacttatattcgacaaatcggtgttatagcactgatggctcaaatc
ggttgtttcgttccttgctcagaagcagaacttacaatcttcgattgcatattagcacga
gtgggagcatcagattcacaacttaaaggtgtatcaaccttcatggcagaaatgttagaa
acggctaatatcctcaaatcggcaacttcggaatccctcatcatcatcgatgaattgggt
agaggaactagtacatatgatggttttggtctcgcatgggctatctcggaatatatcgtt
aaggaaataggggcatttatcgaagaaggaatctgtgatcagagtttcggtattcatgtt
gcggaattggtcaaattcccgaagaaagtaattaatatggctaggagaaaggcagaagaa
ttagaagatttcggtacgagtacgaaggtggatgtagattatggtgatcctagttctcag
gagtttgcaaaggaggatgtagaggagggtagtagattgttgaaggaggtgttgaaaaag
tggaaggcggaaattgataagaatggggagatgggtaaggaggagaagattgaggtgttg
aggaggttggtggggggtgatgagaggttattgcagaatccgttttttaggggtataaaa
tgtttgtag
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