KEGG   Sclerotinia sclerotiorum: SS1G_11825
Entry
SS1G_11825        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03250  Viral life cycle - HIV-1
ssl03272  Virion - Hepatitis viruses
ssl04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    SS1G_11825
   03272 Virion - Hepatitis viruses
    SS1G_11825
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    SS1G_11825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssl04131]
    SS1G_11825
   03400 DNA repair and recombination proteins [BR:ssl03400]
    SS1G_11825
Membrane trafficking [BR:ssl04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    SS1G_11825
DNA repair and recombination proteins [BR:ssl03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    SS1G_11825
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_5 AAA_16 RuvB_N DUF815 RNA_helicase TIP49 AAA_14 AAA_22 AAA_2 IstB_IS21 AAA_17 AAA_18 AAA_24 AAA_25 AAA_33 NPHP3_N nSTAND3 Parvo_NS1 Mg_chelatase AAA_7 AAA_28 Torsin ATPase_2 Cytidylate_kin PhoH NACHT AFG1_ATPase bpMoxR DUF5906
Other DBs
NCBI-GeneID: 5482872
NCBI-ProteinID: XP_001586796
UniProt: A7F3H9 A0A1D9QHD7
LinkDB
Position
Unknown
AA seq 430 aa
MSNTDFLGRAIDVVKKAIEADTAAEYDKAYQLYYQSLELFMLALKWEKNAKSKEMIRAKA
GEYMERAEKLKTHLAEADGKRKKPSMMGANGSSTGGKANEEEGDPESKKLRSALQGAILQ
DKPNIKWEDVAGLEAAKEALKEAVILPIKFPHLFTGKRQPWKGILLYGPPGTGKSYLAKA
VATEANSTFFSVSSSDLVSKWMGESERLVKQLFTMARENKPSIIFIDEVDALCGPRGEGE
SEASRRIKTEMLVQMDGVGRDSRGVLVLGATNIPWQLDAAIRRRFQRRVHISLPDLPART
KMFEISVGTTPCELVASDYRKLGELSEGYSGSDISIAVQDALMQPVRKIQTATHYKKVMV
DGVEKLTPCSPGDAGAMEMSWTEVDSDKLLEPPLQVKDFIKAIKGARPTVSQEDIQRSTE
WTNEFGSEGA
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgtcaaacaccgatttcctcggccgcgccatagacgtggttaaaaaagctatcgaagcc
gacactgcagccgaatatgataaagcataccagctctactaccaatccctcgaactcttc
atgctcgcacttaaatgggaaaagaatgccaaatctaaggaaatgatccgcgccaaagca
ggtgaatacatggaacgagccgaaaaactaaaaacacatcttgcagaggcggatggcaag
cggaagaaacctagtatgatgggtgcgaatgggagttcaacgggaggaaaagcaaatgaa
gaggaaggagatccggaaagtaagaaactgagaagtgcattgcaaggtgcgattttgcag
gataaaccgaatattaagtgggaagatgttgcgggtttggaggcagcgaaggaagcactg
aaggaggcagttatcctgccaattaagttcccgcatttgtttacggggaaaagacaacct
tggaagggtattctgctttatggaccaccagggacgggaaagagttatttggctaaggca
gtggctacggaggcaaatagtacgttcttcagtgtgagcagttcggatttggttagtaaa
tggatgggagagagtgaaagattagttaaacagttatttaccatggcccgggaaaacaaa
ccctctattatcttcattgatgaagtagacgctctttgcgggcctagaggagaaggagaa
tcggaagcctcaagacgtatcaaaacggaaatgcttgtacaaatggatggtgtaggaaga
gacagtcgaggcgtgttagttctaggtgctacaaatattccctggcaactagatgccgcc
attcgacgtcgtttccaacgtcgtgttcacatttccctccccgatttacctgcacgaaca
aaaatgttcgagatcagtgtcggtaccacaccttgtgaactagtggcatcggattacagg
aaattgggagaattaagtgaaggttactctggaagtgatattagtattgcggttcaagat
gctctcatgcaacctgtacggaagattcaaactgctacacattataaaaaggtcatggtc
gacggcgtagaaaaattaaccccctgctcgcccggcgacgctggcgctatggaaatgtca
tggacagaagtcgattcagacaaactcctcgagccaccccttcaagtaaaagatttcatc
aaagccatcaagggagctagacctaccgtctcacaagaagatatccagaggagtacggaa
tggacaaatgagtttggtagtgaaggtgcttaa

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