Sclerotinia sclerotiorum: SS1G_11860
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Entry
SS1G_11860 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14289
exportin-5
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_11860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssl03016
]
SS1G_11860
03036 Chromosome and associated proteins [BR:
ssl03036
]
SS1G_11860
Transfer RNA biogenesis [BR:
ssl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
SS1G_11860
Chromosome and associated proteins [BR:
ssl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
SS1G_11860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
5482934
NCBI-ProteinID:
XP_001586831
UniProt:
A7F3L4
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MTRTAKREIGRKALPKKKNKRREGVKQFNRIILIITTTNEVSAAQTNGNTALLSQIHEAL
ELVHNPYSSNQSRQQASSFLENIKAEDEAPYHGFTLASDKSQQPVVRHYALSLLEHAIKH
KWAAYSEGQASALRQWVIQLSENLVQEDPLYLRNKTAQLWVEIAKRSWGSEWTDMDKLLV
RLWELPGTVVHKEFVLFVLETLSDEVFNGEDAVTVLREGALSRACVEIFTPAVVLSEAFP
NRQLGTVLRHGDEGWLASVQALFALYTRVHFSDEEFIELMMSNLGLFVESRILAIPESSD
LPNLLNLFLAIAQSQSLVVSIPVILTWTKLLRSPMIGASSFITPLIAPLLELCTSRLIRY
ENMPDDCEDPEYIFLKEDIDTQPERHAFLGNYRRYCSQVIELVVRQKQSEALYHILGQVD
NSLQHLYDGCPAFTVENYSKTSIPILRVDKNFTVVEAALKGFMKWRAGHGADPQRDEQER
TSIESNLETWCERFLKLRFEDPIIQKRIIQLAVALSTTALDKKVGFMLKVLEHILMIQPI
EYPNAPAYNEAVKELQTESAYELQRLAGKMPDQLLDVYDQLEAKVNEIISTRNLDKKRQT
SYQTFLFTIIHRNSKIDPEIRLQKLKRFLTPVQTSWQDPEMNKAIEGFNGFCNLLGLNRV
RDFLVTRRVHEIQDWSTYQLDSEAQSIQKEMEERLKALPLRTTKSYLGCSTEKLDKEDPA
HAHAFHNPANWNELPPEMSPIVSRILTDRFWQAGISVGSKDDFYARVTGTKSTMEGLASS
IRGSIRTVRESCYSILYCMSRLDVDFYGFSELPGPLAHALFADAHCLSSHQLIALLNVVR
LMVDDCPVEVRSHFVPPILASCFTQMDAKCSSEWERLSHKEVVPADEDTLTEEMKEESIL
RQLTYTSVMMIAGFLDPARPNIGSAPAPRSAKEASTFVQTQANAYPSMRTFCLTSSAILE
SLLLFLTHAVRMRDTRCCSVVLRVFRSIIPDFDSDNESPLASSIREFISTEVLKAVISSL
NEPYFVDLQKDLAHVIASILVSYGPVTATPKQILLSLPGIQGKAVDKCIETLGRQGSQQR
TQRALVLDLLKDLKGVSISEQGRISKSASVVRKERSKMQEAFMRGPVDADKKIKSEIDDL
EGVAGLFDN
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgactagaacggcgaaaagggaaattggcagaaaggcactaccgaagaagaagaacaag
cgaagagagggagttaaacaatttaaccgaattatattgattatcacaactaccaacgag
gtatcagctgcacaaacaaatggaaacacggcattattatcacaaatccatgaagcccta
gaacttgtccataatccgtattcctccaatcagtctcgtcaacaagcgtcaagctttcta
gagaatatcaaagccgaagacgaagctccttatcatggttttaccttagcatccgataaa
tctcaacagccagtcgtacgccactatgcactttctctcctagagcacgcgataaaacat
aaatgggcagcatattcggaagggcaagcaagtgcgttgcggcaatgggttattcaactc
tccgagaatctagtccaagaggaccccttatatctgcgaaataagacagcgcaactttgg
gtagaaattgcaaaaagaagctggggatcagaatggactgatatggataaacttcttgtg
agattatgggagcttccgggcactgtggttcacaaagagtttgttctgtttgttctcgag
accctctccgatgaggtctttaatggtgaagatgctgtcaccgttttacgagagggcgct
ctgagcagagcttgtgttgaaatctttacaccagccgttgtgctatcggaagcattccca
aatcgacagctaggtaccgttttgagacatggagatgaaggttggctagcatctgttcaa
gctctatttgcactttatactcgcgtgcatttttcggatgaagaatttatagaactcatg
atgtcaaatcttggattattcgtagagtcaagaattttagctatacccgaatcttccgat
ctccccaaccttttgaaccttttccttgccattgctcaaagtcaaagtcttgtcgtttcg
atacccgttatacttacctggacaaaattacttcgctcaccaatgattggagcgtcttct
ttcataacccctttgatcgcacctcttttagaactttgtacttcacgcctcattcgatat
gagaacatgccagatgactgcgaagatccggagtacatatttctgaaagaagacatcgat
acgcagccagagagacatgcattccttgggaattatcgtcgttattgctctcaagtcata
gagcttgttgttagacaaaagcaatccgaggctttataccatatattaggtcaagtggat
aactctttgcagcatctttatgatggatgtccagcttttactgtggaaaactattccaaa
acttcaattccaatactacgagtcgataaaaatttcactgtagtagaagcagcactaaag
ggatttatgaaatggcgcgcgggacatggcgccgatcctcaacgagatgagcaagagcgc
acaagcatagagagtaatttagaaacttggtgtgaacgattcttaaagcttagattcgag
gatccaataattcaaaagagaattatacagcttgcggtcgctctttcgacgaccgcttta
gataagaaagtcggcttcatgttgaaagtcttagagcatatcttgatgatacaaccaatc
gaatatccaaacgcccctgcttataacgaagctgtgaaagagttacagacagagtccgct
tatgagttacaacgactagccgggaaaatgcctgatcaattattggacgtctatgatcag
ctcgaagcgaaggtcaatgaaatcatttctaccagaaaccttgataaaaaacgccagacg
tcttatcaaactttcttattcacaatcatccatcggaactcaaagattgatccggaaatt
cgcctccagaaactgaaaaggtttttgacacctgtacaaacaagctggcaggatccagaa
atgaataaggcgattgaaggtttcaatgggttctgtaacttactcggattgaaccgcgta
agagacttccttgtcacaaggcgagttcacgagattcaggattggtcgacatatcagcta
gactccgaggcgcaatcaatacagaaagaaatggaggagagattaaaggcgttacctttg
agaactacaaaatcatacctaggttgctcaacagagaaactggataaagaagacccggct
catgctcatgctttccataaccccgcgaattggaacgaacttcccccggaaatgtcacct
attgttagtcgcattttgacagaccgcttctggcaagctggaatatctgttgggagtaaa
gacgacttctacgctagggtcactggtaccaaatctactatggagggtcttgcatcatct
atacgaggctcaatacgtaccgtgagagagtcttgttattcaatactttattgcatgagt
cgtttggatgtcgacttttatggattcagcgagctccctggacctcttgcacatgctcta
tttgcggatgcgcattgcctgtcttcgcatcaacttattgcgttgttgaatgttgtgcga
cttatggtggatgattgtccagtggaagttcgatctcatttcgtacctcctatattggct
tcttgcttcactcaaatggatgctaaatgtagttccgaatgggaaagactttctcataaa
gaggtggttcctgcagatgaagacactttgactgaagagatgaaagaagagagcatattg
cgacaattgacatatacatctgtcatgatgattgctggatttttagatccagcacgacca
aatattggaagcgctcctgcgccaaggtcagccaaagaggcttcgacctttgttcaaact
caagcgaacgcatatccaagcatgagaacgttttgcctcacatcatcggccattctagaa
tctcttctactcttccttactcacgcagttcgcatgcgagatacccgttgctgtagtgtt
gttctccgcgtgttccgatcaatcatccctgattttgattctgataacgaatcgcccctc
gcttcttccattcgagaatttatcagcaccgaagtccttaaagctgttatctcatcacta
aatgaaccatatttcgtagacttacaaaaagatcttgctcacgtaattgcatcgattcta
gtttcttacggaccagttacagcaaccccgaaacaaatcctcctcagtttacctggtatt
caagggaaagcagtagataaatgtatcgaaacattaggaagacaaggaagtcaacagaga
acccagagagcgctagtattggatttgttgaaggatctaaagggtgtgagtattagtgaa
cagggaaggatctcaaagagtgcgagtgtagtgaggaaggagaggagtaagatgcaagag
gcttttatgaggggtcccgttgatgctgataagaagattaagagtgagattgatgatttg
gagggtgtggcggggctttttgataattga
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integrated database retrieval system
