KEGG   Sclerotinia sclerotiorum: SS1G_12129
Entry
SS1G_12129        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K12876  RNA-binding protein 8A
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03013  Nucleocytoplasmic transport
ssl03015  mRNA surveillance pathway
ssl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SS1G_12129
  09122 Translation
   03013 Nucleocytoplasmic transport
    SS1G_12129
   03015 mRNA surveillance pathway
    SS1G_12129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssl03019]
    SS1G_12129
   03041 Spliceosome [BR:ssl03041]
    SS1G_12129
Messenger RNA biogenesis [BR:ssl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     SS1G_12129
Spliceosome [BR:ssl03041]
 Complex C
  Other components
   EJC/TREX
    SS1G_12129
SSDB
Motif
Pfam: RRM_1 RRM_3 DUF6844 MCP_V20_C
Other DBs
NCBI-GeneID: 5483418
NCBI-ProteinID: XP_001587100
UniProt: A7F2I2
LinkDB
Position
Unknown
AA seq 152 aa
MADTEMDVDAPSSPQEQRNEPKNASMTTHSNATAVRSIEGWIIIVTNVHEEASEEDLNDK
FADFGEIKNLHLNLDRRTGYVKGYALIEYPTLEEARAAIDGAHNTKLLEQTVEVDFAFVR
PPPGGKGRGGRAPAKGRARSRSRSPNGRDGGD
NT seq 459 nt   +upstreamnt  +downstreamnt
atggctgataccgaaatggatgtcgatgcgccttcatcaccacaggagcagcgaaatgaa
ccaaagaatgcctcaatgacaactcactccaatgcgacagcggtacgatcgatcgaaggc
tggattatcatcgtcacaaatgtacatgaagaggctagcgaggaggatttgaatgacaaa
ttcgcagactttggagagatcaaaaatcttcatttgaacctggatagaagaactggatac
gtcaagggttacgcgctgattgaatatccaactttggaagaggcaagggcagcgatcgat
ggtgcgcataataccaagttgctggaacaaactgtggaggtagactttgcctttgttaga
ccgccaccaggaggaaaaggtcgaggaggtcgggcacctgccaaaggtagagccagaagc
cgatcccgtagtcccaatggtagagatggaggcgattga

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