Sclerotinia sclerotiorum: SS1G_12338
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Entry
SS1G_12338 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K07880
Ras-related protein Rab-4B
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_12338
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssl04147
]
SS1G_12338
04031 GTP-binding proteins [BR:
ssl04031
]
SS1G_12338
Membrane trafficking [BR:
ssl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
SS1G_12338
Exosome [BR:
ssl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
SS1G_12338
GTP-binding proteins [BR:
ssl04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
SS1G_12338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Motif
Other DBs
NCBI-GeneID:
5483262
NCBI-ProteinID:
XP_001587308
UniProt:
A7F340
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MVRPRRSSAASDESASTTRDQDQVEAATGTERFRSVSRSYYRGAAGAVLCYDITNHNSFT
GLPTFLNDARALASPNLTLLLVGNKTDLSESNGDLIDTSVPPETPSSMNSKNSSFPYTAG
GSVNSSSGYIGIGSQLKASVAPDGREVSAEEASRWASSANIPVSVEVSALSGDNVEEVFN
RLARMILTKIELGEIDPDDPMSGIQYGDGGRWDTNASDGASVKSGMTIEDGNGRRRRKGK
RGQNWGLGGMREWEEFMYLEWSRLILWSVAGIVGTAQDVNGGNNDDLFRASPRCHWKDVI
YISERRGLMRVILLSTTLLNLLCSYHGSPDIVEVVRRYYMSRI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaccgaggcgctcatccgctgcaagtgacgaaagtgccagtacgaccagagat
caggaccaagtggaagcggcaacaggcactgaacgatttcgatctgtatcgcgctcttat
tatcgtggcgctgcaggtgcagtcttatgttacgatatcacaaaccataattcctttact
ggacttcctacctttctcaacgacgcccgagcgctggcttccccaaaccttacactacta
cttgtgggtaataagacagatctttctgagtcgaatggggatttaatagatacatctgta
ccaccggaaacaccatccagcatgaacagcaaaaactcctcatttccatatactgccggg
ggatctgtgaattcgagttcgggatatatagggataggatcacagttgaaagcaagtgta
gcgccagacggacgagaagttagtgcggaagaagcatcaagatgggctagttctgcgaat
ataccagtttcggttgaggtttctgcgttatccggagataatgtcgaggaggtttttaat
aggctggcgaggatgatattgacgaagatagaattgggagaaattgatccggatgatccg
atgagtggaatacaatatggggatggaggaagatgggatacaaatgctagtgatggggct
agtgtgaagagtggaatgacgattgaggatgggaatggaaggaggagaaggaaggggaaa
agagggcaaaattggggacttggagggatgagggagtgggaggagttcatgtatcttgag
tggtcaaggctcatactgtggtcagtggcaggtatcgtagggacagcacaagacgtgaat
ggcggcaataatgacgatctgtttcgcgctagccccaggtgtcattggaaagatgttatc
tacatcagcgaaagacgggggcttatgcgtgtaattcttctttccacgactctcttgaac
cttctttgctcatatcatggaagtcctgatatcgttgaggtcgtaagacgatattatatg
tctaggatataa
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integrated database retrieval system
