Sclerotinia sclerotiorum: SS1G_12480
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Entry
SS1G_12480 CDS
T01071
Name
(RefSeq) conserved hypothetical protein
KO
K14006
protein transport protein SEC23
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SS1G_12480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_12480
Membrane trafficking [BR:
ssl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
SS1G_12480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
5482477
NCBI-ProteinID:
XP_001586493
UniProt:
A7F4F5
A0A1D9Q795
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MDIEALKEQWSEVEDRDGVRLSWNVFPSSRMEASRLVVPIGALYTPLKEKPDTPLLQFEP
VICKQPCRSVLNPFCQVDVRARLWICPFCLSRNPLPPHYKDINPAAIPPELHPANTTIEY
RLSRPAPSPPIFLYVVDTCQEEDSLSALKESLVMSLSLLPENALVGLVTFGTMAQVHEIG
YTECPKSYVFRGSKDYTAKQIQEMLGLSAAGLRPGMQQPQPGKPMPPMGPAARFLLPVQQ
CEFQLTKALEQLQKDPWPVANDRRNLRCTGVALSVAVGLLETSFQNAGGRIMLFAGGPAT
EGPGLVVGPELREPIRSHHDIDRDNIKYYKKALKFYDNLAKRTAHNGHIIDIFAGCLDQV
GLLEMKGLSNSTGGHMILTDSFTSSMFKQSFVRVFEKDGDDNLLMGFNASLEVLTTKELK
VTGLIGHAVSMNKKSTSVGETECGIGNTCSWKMCGIDPNSSYGIYFEIAGQAGPAQHQAQ
AKGMMQFLTYYQHSSGQFHLRVTTISRNLSGPAGDPAIAQSFDQEAAAVLMSRIAVFKAE
VDDGPDVLRWVDRMLIRLCSRFADYRKDDPSSFRLEKNFTLYPQFMFHLRRSQFLQVFNN
SPDETAFYRHVLNHEDVSNSLIMIQPTLDSYTFDQDGSQPVLLDSTSIQPTHILLLDTFF
HILIFHGETVAEWRKAGYQDQEGYENFAALLEQPKEDARDLITDRFPLPRFIVCDAGGSQ
ARFLLSKLNPSTTHTTGAYGGVGAQTAQTIFTDDVSLQTFMDHLMKLAVSGTN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaagctttgaaggagcaatggagtgaagtggaggatcgtgatggagttcgg
cttagttggaatgttttcccaagctctcgcatggaagcctcgaggctcgttgtccctatc
ggcgcactttatacgcctcttaaagagaaaccagatacaccacttttacaattcgaacca
gtcatctgcaaacagccatgtagatcagtgttgaatcctttctgtcaagtagatgtcagg
gcacgtctttggatctgtccattctgcctgtctcgaaaccctcttccacctcattacaaa
gacataaatcccgcggcaatcccccccgaacttcaccctgcgaataccacgatcgagtac
agactttcgcgaccagctccaagtcctcccattttcctttatgtcgtggatacgtgtcaa
gaggaggacagtctatctgcgcttaaggaatctcttgtgatgagcttgagtctcctgcca
gaaaatgcactggtcggcttggttacatttggaactatggcgcaagtacatgaaattggc
tatacggaatgtccaaaatcatatgtgtttagaggcagcaaggactacacagccaagcaa
atccaggagatgcttggactttcggcggctggattgagacctggaatgcaacaaccgcaa
cctggtaaaccaatgcccccaatgggacccgctgctcgattcttgctacccgttcagcaa
tgcgaattccagcttaccaaggctctcgagcaattacaaaaggatccatggccggtcgcg
aatgacagaagaaacctaagatgtactggtgtagcgttgagtgtggcggttggactacta
gagacttcattccagaatgctggtggtcgtattatgctcttcgcaggcggtcctgctact
gaaggtcctggtttggtggttggtcccgaattgagggagcccatcagatctcatcatgat
atcgacagagacaacatcaaatattataagaaggctcttaagttttacgacaatctagcc
aagagaacagcacacaacggacacatcatagacatatttgccggatgtctagatcaagtc
ggtctccttgagatgaagggcctttcaaactcgactggtggtcatatgatcttgacggat
agtttcacatcttctatgttcaagcagtcattcgtccgtgtctttgagaaagacggcgac
gataatctattaatgggtttcaatgcttccttggaagttttgactacgaaagaattgaag
gtcactggtttgatcggtcatgcggtatcaatgaacaagaagtctacttcagtgggagaa
acagagtgcggtattggcaatacttgttcatggaagatgtgtggtatcgaccccaactct
agctacggaatttactttgaaattgctggtcaagctggccctgcccaacaccaagcccaa
gcaaagggtatgatgcaatttcttacatactatcagcattcttcgggccaattccacctc
cgtgtaacgacaatctcgcgtaacctgagtggaccagccggagacccagccattgcacaa
tcattcgatcaagaagcggccgcagttttgatgtctagaattgctgtattcaaagccgaa
gttgatgatggaccagacgttttacgatgggtggatagaatgctcatccgcctatgttcg
agattcgccgattatcgaaaggatgacccatcatctttccgacttgagaagaacttcaca
ctttacccacaattcatgtttcatctcaggagaagtcagttcttgcaagttttcaataac
tcgcctgatgagactgcattttatagacatgtactcaatcatgaggatgtcagcaactcc
ttgattatgatacaacctactcttgactcgtacacattcgaccaagatggtagccaaccg
gtactactcgattccacttccattcagccaactcacattcttcttttggatacattcttc
cacatcctgatattccacggagagaccgttgcggaatggaggaaagcaggctatcaagat
caagaaggttatgagaatttcgccgctcttctcgaacaaccaaaagaggatgctagggat
ttgattaccgaccgattccctctgccacgtttcatcgtttgcgatgctggtggctctcaa
gcacgtttcttgttgtcaaaacttaatccatccactacacatacgacgggtgcatatggt
ggagtgggtgctcaaacagcacaaacaatctttactgacgacgtctccctgcaaactttc
atggaccatctcatgaagttggctgtaagcggaacgaattga
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integrated database retrieval system
