Sclerotinia sclerotiorum: SS1G_12540
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Entry
SS1G_12540 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssl03041
]
SS1G_12540
03009 Ribosome biogenesis [BR:
ssl03009
]
SS1G_12540
Enzymes [BR:
ssl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SS1G_12540
Spliceosome [BR:
ssl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
SS1G_12540
Ribosome biogenesis [BR:
ssl03009
]
Eukaryotic type
Pre-60S particles
Helicases
SS1G_12540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Phytoreo_P8
Motif
Other DBs
NCBI-GeneID:
5482731
NCBI-ProteinID:
XP_001586553
UniProt:
A7F4L5
A0A1D9Q6R8
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MAPKRNRDDDFVLTLSDNEGEDLTNVIEEELPLDPSSNKKRKRNDDIASTKKSKKSKKKS
EDEDVEEEEIWGIKDADDGAMDSDFEFALEADGKGGADLEEFEGWGFDGAKKGLNGGDKK
AVDIDEIIARRREKKKATGKKGEAEDEVIAEKEDVVASDEEQDAPEEMDFEDEDDEFMAE
DGFGMGAGSAEESGAEEDSEASDNEGAEDDDSDNDSVASPAPHPDDAASEASDDDEDIDE
DPEEAAKREAFFAPEEKPVKGAKPELNSTFQSMSLSRPILRGLATVGFTQPTPIQSKTIP
VALLGKDVVGGAVTGSGKTAAFIVPVLERLLYRPKKVPTSRVAILMPTRELAIQCHAVAT
KLASHTDIKFCLAVGGLSLKVQEAELRLRPDVIIATPGRFIDHMRNSPSFTVDTLEILVL
DEADRMLEAGFADELNEILTTIPKSRQTMLFSATMSSSVDNLIRVGLNRPVRLLVDSQKS
TAGTLTQEFIRLRPGREGKRMGYLLYLCANVYTDRVIVFFRQKKEAHRARIIFGLSGLKA
TELHGSMSQEQRIKSVEAFRDGKASFLLATDLASRGLDIKGVDTVINYEAPQSHDIYLHR
VGRTARAGRSGRACTIAAEPDRKVVKAAVKASRTQGAKVVSRVIEASEADSWSEKVDEMA
DEIEEILKEEKEDKILAQAEMEVRKGQNFMDHEAEIKGRPKRTWFESEKEKLAAKKLGME
ELNGVVGGKKKGKLSNKDKKKLDDKGERLEGRVWKKGRQERDGKGVLAKEKGKKKVKGGK
PAGLGKKKAMKPMRTGGAKRR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaacgtaatcgcgacgatgacttcgttctcacactgtcggataacgaagga
gaagatttaaccaatgtcatcgaagaagaattacctttagatccttcctcaaacaaaaaa
cgcaaacgcaacgatgatattgcttctactaaaaagtccaaaaaatcaaagaagaagtcc
gaggatgaagatgtggaggaagaggaaatatgggggatcaaggatgcagatgacggggct
atggattcagactttgaatttgcattggaagcagacggaaaaggtggtgcggatttagag
gaatttgagggttggggattcgacggagcgaagaagggactaaatgggggtgacaaaaag
gcagtggatattgatgaaattattgcacgaaggagagaaaagaagaaggcgacagggaag
aagggagaagcggaggatgaagtaattgctgaaaaagaggatgttgtagcttcggacgaa
gaacaagatgcgccggaggaaatggatttcgaggacgaggatgatgaattcatggctgaa
gatggatttggaatgggtgctggatctgcggaagagtctggcgcagaagaggactctgaa
gcatcagataacgaaggggcagaagatgatgattccgataacgattccgtcgcatcacca
gcaccgcatccagatgatgccgcttctgaggcttccgatgacgatgaggatatagacgaa
gaccccgaggaagctgctaaaagagaggcattcttcgcccctgaagaaaaaccagtcaag
ggtgctaagcccgaactcaattcaacatttcaaagcatgtccctatctcgaccaattctc
cgaggtcttgctacagttggtttcactcaacctacaccaattcaatcgaaaactatacct
gttgcattactgggcaaggatgtcgttggtggagctgtcactggttctggaaagactgca
gcatttattgttccagttcttgaacgtcttctgtacagaccaaagaaagtgccaaccagt
agagttgccattcttatgccaactcgtgaattagcaatccaatgtcacgccgttgctacc
aaacttgcaagccatactgatatcaaattctgtttggctgttggaggtcttagtttgaaa
gttcaagaagccgagttacgtcttcgtccagatgtcattattgctactccaggtcgtttc
attgatcacatgcgcaattccccaagttttactgttgatacattggagattctcgttctc
gatgaagctgatcgtatgcttgaagctggttttgctgatgagttgaatgagattttaaca
actattcctaagtctagacagactatgctcttttccgcaacaatgtcttcatcggttgat
aacctcattcgtgttggtcttaataggcctgtgcgattacttgttgactctcaaaaatca
acggctggtactttgacacaagaattcatccgtcttcgtccaggaagagagggtaaacgt
atgggttatcttttgtatctctgcgcaaatgtctacactgatcgagtcattgttttcttc
agacagaaaaaggaagctcatagagcacgtataatctttggattgtctggtctcaaagct
actgaattgcacggtagcatgagtcaagaacagcgtatcaaaagtgtagaagctttccgt
gatggcaaagcttctttccttctcgccaccgatcttgcctcccgtggtctcgatatcaag
ggtgttgacacagtaattaattacgaagctcctcaatcccatgacatctatctccatcgc
gtaggacgtacagctcgtgctggtcgttctggacgcgcttgtaccattgccgctgaacca
gatcgtaaagtcgtcaaagcagctgtgaaagctagtcggacacaaggagctaaagttgtc
agtcgggtaatcgaagctagcgaggcagatagctggagcgaaaaagtcgatgagatggca
gatgaaattgaagaaattttgaaggaagaaaaagaagataaaattcttgctcaagcagag
atggaagttagaaaaggacaaaatttcatggatcatgaagcggaaattaaaggaagacct
aagagaacctggtttgaaagcgaaaaggaaaaattagcagcgaagaaattgggaatggaa
gaattgaatggggtagtgggtggaaagaaaaagggtaagttgagtaataaggataaaaag
aagttggatgataagggagagagattagaagggagggtttggaaaaagggaaggcaggag
agagatgggaagggtgttttggcgaaggagaaggggaagaaaaaggttaagggtgggaaa
ccggctgggttgggtaagaagaaggctatgaagcctatgaggacggggggtgcgaagagg
aggtaa
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