Sclerotinia sclerotiorum: SS1G_12551
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Entry
SS1G_12551 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SS1G_12551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssl03009
]
SS1G_12551
Ribosome biogenesis [BR:
ssl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SS1G_12551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
HEAT
GNC1_N
Motif
Other DBs
NCBI-GeneID:
5482756
NCBI-ProteinID:
XP_001586564
UniProt:
A0A1D9Q6P3
A7F4M6
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MASSLKAQLAQIATNSTNSLNLKAQKAAHSKSLIFEPRVAASQSFDILYTLCHEGFQELC
LLDGRFLEFQKTIFSEQSQTIDRTQLPVAEISELNKRLEAFLGLVGGRLRLNPAIKAVEW
LVRRFRIHEYNTSFLLTTFLPYHTLPIFTTLLSILPSTVPVEYKFLAPYIRSLTQPQRRP
IVAAATDSTVFASTLNAYVLHVCKARQHYPAILAFWAGIMTEATSNMLDKARSGRRGVQQ
QNEQDVILRLLPTLNEGLSMQKVPDLRIGCYMILSILASKGGLDDKLLTAMMEALVLGWS
AETVRPGLVCLSILAQHRGAKQITRRVTKELLKVPDLPMQLIELGKERRIDRLSNGLCLA
LVDRISKSGEVQGLSTIEKIVEHGLLSDAQTSVVVKHLLLVAHRVDDATDSEKNTRTHLA
STLVALTQLSGHVGAVIQGALKETDVDMDELEMKLSTTIRRIEMPKAEDEDVIMGDEGAK
AETRPDFRQLIEKLPQSTAKETSFLAHGTSHIYQDLCQAFLVAAVNGGDLDVFDELSVLD
RASALEKTLYLTFYIRTWCGPYPVMARVSALHMVAQYLSGNGNASVDIQGIIPYAISALA
DPAPKVRRAAAELILAIETFYPVSASTKKASSSRRQWAFDDIYGPGVKTQETKWLSVDIA
VRLLREVLVPALEECVLDKTHIESVLEQSLNSPRASAEPSKKNEARLTQTARASILSFLS
SHVIQTPVYLVKLRLLVILNHVRSIASTTRTKVLLPALQQWASLSPEVALQHSRDEQFVM
ADFDKQAAATVVANDKDGLQFFTQIVHGEIASDRPTLLEAIFARLREMWTSLKGDVQLQT
AQMLMDASQSSPEETSYNGKSTEEALELLRNAPLSTEILLSFLDQLPTAAKLTDAPPASK
RRRTSHGEVARASLQDPKQLAAAIRQVTFVLQLIDSSDPGSHPELLKGLFNTLAELQHFK
AQVSSELAYLQDLVLNSLLSILKAYRADPGMKLDHSDIRADLLVDCVQKTASPQVQNGAL
LMIAALADIAPEVVLHSVMPIFTFMGSSVLRQNDDYSAHVISQTIREVIPPLISSLRKDK
GNPVTGAAELLLSFVAAYEHIPVHRRKGLFISLVQTLGAEDFLFALLTMLVDKYGVNDDV
KSFAAELTNAFSVEVQLQSSVKYVELIDDLLKPKPTYSLILLGAHEKIDPQRAALNELTL
LPHILSQRRLITQTAKLLDRDDMDAARIRELYSTLLENLLVLTESLKDKKAMHNACGDIL
ESILGLLSTSEFVKSVEGLLDRPNEDLRRKILRSLQLRIDQESPSDAVSRVAMLGFLPQL
TSIIRESTDMPYKRTAVACVEKISEKYGKKDLEAVSAAAETIASNHCLGQSDAGLQIMAL
LSLASLVEILREGVVSVLPVALPKALEYIKSSIEDTVEAQKLHNAGYTFISALVQHLPYM
ITGGYLDTLLSISNASAEAELEDEADEIRENCLHLAAKRVDAKSMFMALEQNWAPAVTAG
TWAIREQLEMLSMAIKAHPKSVVSKHSTILAKIFQNAFDLRRQLSNVDNSNQDDETISTI
EGQVNEVALEMIYKFNDSTFRPIFSNLVEWASSSIPKKDKSGRNLRLQSVYGFMAMFFDN
LKSIVTSYATYLLDNAVQILKETDIKDDAARELWSRVLRALIPCFEHDQDDFWQSPAHFK
AIAPVLCDQFKNAPGLALVEELVPAIVELAAAADSSDHHKELNGMILKHLRSEVSSVRLA
AVKCEQALTDRLGEEWLAMLPEMLPFISELQEDDDDVVEKETNRWIVKIEGVLGESLDSM
LQ
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcacttaaagcacagttggcgcagattgcgaccaattcgaccaattcttta
aacctcaaggcgcaaaaggcagcgcattcaaaatctttgatttttgaacctagagttgcc
gcttcacaaagtttcgatatcctctatacactatgccatgagggatttcaagaattatgt
ctactcgacggccgatttctcgagtttcaaaagacaattttcagcgagcaaagtcaaaca
atagatcgaacacagttgccggtggcagagatttctgagttgaataaacggctagaagct
ttcttgggattagttggtggccgtctacgtctgaatccagcaataaaagcagttgaatgg
ttagtgagaagattcagaatccacgagtacaatacatcatttcttttgacgactttcctc
ccttaccatacccttcctatatttaccacattactttccatattaccctcgacagtcccc
gtagaatacaagtttttggcgccttatattcgatccttgactcaaccacaaagaaggcca
attgtcgctgctgcgaccgatagtaccgttttcgcttcaacactcaatgcatatgttttg
catgtatgtaaagctcggcaacattatcctgctattctagcattttgggctggtatcatg
accgaagctacgagtaacatgttggacaaagcccgctcgggaagaagaggagtccagcaa
caaaacgaacaagatgtgatactgagattattaccaactctcaacgaaggtctttccatg
caaaaggtcccggacttacgaattggatgttatatgattttgtcaatcttagcttctaaa
ggaggactggacgacaaacttctgacagcgatgatggaagcattagttctcggctggagt
gctgaaactgttcgtcctggattggtctgtctctcgattttggcacaacacagaggcgca
aagcagattacgagacgggtaaccaaagagttgctcaaagttccggatctaccaatgcag
ttgattgaattaggaaaagaacgacgaatcgaccgactttctaacgggttgtgtcttgcg
cttgttgacagaataagcaaaagtggagaggtccaagggctttccacaatagaaaaaatc
gtggagcatggtcttctcagcgacgcgcagacctctgtggttgtgaaacatctgctgctg
gtagcgcatcgtgtggatgatgctacagattccgagaaaaatacccgaacacatcttgcg
tcaactcttgttgcgctgactcaactttctggtcatgtaggggctgttattcaaggcgca
ctaaaggaaaccgatgttgatatggatgaattggaaatgaagctctctaccacaattaga
cggatagaaatgccaaaggcggaagatgaggatgtaataatgggagatgaaggcgcgaaa
gcagaaaccagacctgatttccgacaactgattgaaaaacttccacaaagtactgctaag
gagacctcgttcttagcacatggtacttctcacatctaccaagatctgtgtcaggcattt
ttggttgccgcagttaatgggggtgacctggatgtattcgacgagctatccgtcttggac
cgtgctagtgccctggaaaaaacgttgtatctcacattttatataagaacttggtgtggc
ccgtatccggttatggcccgggtctcggcacttcacatggtagctcaatacttatcagga
aatggaaatgcgagcgtagatattcaaggaatcataccttatgcaatttcagcgctcgcc
gaccctgcgccgaaggtccgtcgtgcagcagcagagcttatcctcgcaattgagacattc
taccctgtcagcgcaagtaccaagaaagcctcgagctctcggcgacaatgggcatttgat
gatatctatggtccaggtgtgaagactcaagagacaaaatggctttcagtcgatattgca
gttcgtcttttgagagaggtattggttccggctttggaggaatgtgttctcgataaaact
catattgagtccgtattggaacaatctttgaatagtcctcgtgcatctgcagagcccagc
aagaagaatgaggctcggttaactcaaactgcccgagcctcaattttgtcatttttgtca
agtcatgtcattcaaacccctgtatacttggtcaagttgagacttctagttattcttaac
cacgttcgtagcattgccagcaccaccagaaccaaagttttacttccggcacttcaacaa
tgggcgtctttaagtccagaagtggcattgcaacactcgagagatgaacaatttgtcatg
gcagacttcgataaacaggcagctgcgaccgttgtagccaacgacaaagatggcctgcag
ttcttcactcaaattgtgcatggggaaattgcgtcggatcgtcctactctgcttgaggcc
atatttgcaagactgcgcgagatgtggacatctttaaagggtgatgtgcaattacagaca
gctcaaatgttgatggatgcttctcaatcctcccctgaggaaactagctacaacggtaaa
tcgacggaagaagctttagaactattgcgaaatgcccctctttcaaccgaaatcctcctt
tccttcctcgaccagctacctacggcggcaaagcttaccgatgctccgccggccagcaaa
agacggcggactagccacggtgaagttgccagagcttctttacaggatcccaaacaactc
gccgctgctatacgccaagtcacatttgtgttgcaacttatcgatagttctgatccagga
agtcatccagaacttctcaagggtcttttcaacaccttggcagagcttcaacacttcaag
gcccaagtttcatccgagcttgcatatctacaagatttagtcctaaacagcctattgtca
attttgaaggcatacagggcagacccggggatgaaactagaccattccgacattcgtgcc
gatttacttgtcgattgcgttcagaaaacagccagtccacaagtacaaaatggtgctttg
ttgatgattgctgcacttgcggatatcgctccagaagttgttcttcatagtgtcatgccc
atctttacatttatgggaagctcagtgttaagacaaaatgatgattattctgcacatgtc
attagtcaaactattcgtgaggtcattccacctcttattagctcgcttcgaaaagacaaa
ggcaaccccgttacaggggctgccgagttgctcttgagttttgttgcagcttatgaacat
attcctgtccaccgtcgaaaaggattgtttatctctttagttcagacgttaggagcagaa
gacttcctatttgcattattaacaatgttggtggataaatatggagtcaatgatgatgtc
aaatccttcgctgccgaattaacaaacgcgtttagtgtcgaggttcagctccaatcctca
gtcaaatacgtcgaattaattgatgatctgttgaaacccaagcccacctattccttaatt
ctccttggggcccacgagaagattgacccgcaacgcgctgctctcaatgagcttaccctt
cttccacatattctttctcaacgacgattgattacacaaactgcaaaacttcttgaccga
gacgatatggatgctgctagaattcgcgaactctattcaacattattggaaaacctattg
gtcttgacagagtccttgaaagacaagaaggcaatgcacaatgcttgtggggacatccta
gaaagtattttgggtctcctttccacaagtgaatttgtcaaatcagttgaaggacttctg
gatagacccaacgaggacttgcggcgaaagattttgcgctctttacaacttcgcatcgac
caagaaagcccatcagatgctgtttcaagagtggcaatgcttggatttctaccccagctc
acttcaattattcgagagtctactgacatgccttataagcgtactgctgtagcatgtgtc
gagaaaatctctgagaagtatggcaaaaaggatctcgaagcagtatctgctgctgcagag
actatcgcaagtaatcattgcttgggccagagcgatgctggcttgcaaataatggctctc
ctatctttagcttctttggtagagattttgagagaaggtgttgtctccgtattacctgtt
gcccttcccaaggctttggagtacatcaaatcaagcattgaagatactgttgaggctcaa
aaacttcacaacgccggttacacttttataagcgctctcgtacaacatctgccctacatg
attacaggtgggtaccttgatacacttctttcaatatcaaacgcttcagcagaggccgag
ctcgaagatgaggcagatgaaattagagaaaactgtcttcacttggccgcaaaacgcgtc
gatgctaagagtatgtttatggctttggagcaaaactgggcaccagcagtaacggcagga
acttgggcaattcgtgaacaacttgaaatgcttagcatggctattaaagctcatccaaag
agtgtcgtctctaaacattccaccatacttgcaaaaatattccaaaatgccttcgacctt
cgaagacagctttccaacgtggataattctaatcaagacgatgagactatctcgaccata
gagggacaagttaacgaagtggctttagagatgatctacaagttcaacgattcgacattt
agacctatattctccaaccttgtcgaatgggcctcgtcatcaatacccaagaaagacaag
tcgggtagaaatttgcgtttacaaagtgtttatggcttcatggccatgttttttgacaat
cttaagtcaatcgtcacaagctatgcgacatacctgcttgataatgccgtacagatcttg
aaagagacagatatcaaagatgacgctgcaagggaattgtggtcaagagttcttcgagct
ttgataccatgcttcgagcatgatcaagacgacttttggcaatctccagctcatttcaag
gcaattgcacctgtcttgtgtgatcaatttaagaacgcccccggattagctttggtcgaa
gaacttgtcccagctatcgtcgaactcgctgccgccgctgattcttcggatcatcataaa
gagctcaacggaatgattcttaaacaccttcgttctgaggtatccagtgttagactcgca
gctgtcaaatgtgaacaagcactgacagacagattgggagaagaatggttggctatgttg
ccagaaatgttgccattcataagtgaactccaggaagatgacgatgatgtagtagagaag
gagacaaatcgctggattgtaaagatcgaaggggtgctgggagagagtttagactcaatg
cttcaataa
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