Sclerotinia sclerotiorum: SS1G_12747
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Entry
SS1G_12747 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14004
protein transport protein SEC13
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
ssl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_12747
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SS1G_12747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_12747
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_12747
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SS1G_12747
Membrane trafficking [BR:
ssl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
SS1G_12747
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
SS1G_12747
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
SS1G_12747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_EML
Polysacc_synt_2
Motif
Other DBs
NCBI-GeneID:
5482418
NCBI-ProteinID:
XP_001586172
UniProt:
A7F572
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MAQVITNAGHDDMIHDAALDYYGRRLATCSSDRTVKIFEIEGETHRLTETLKGHEGAIWS
ISWAHPKYGNILASAGYDGKVLIYRETSSVWTKIYDFALHTASVNSLSWCPHESGCLLAC
ASSDGNVSVLEFKDNSMDHKIFHAHGIGVNSVSWAPSSQPGSLVSANAGGKEGGVRRFVT
GGSDNLLRIWGWDQASLSYKVEGAPLQGHGDWVRDVAWSPTVLQKTSASQDKTVRIWTSS
AANPGQWESKVLQFEREVWRVSWSLSGNVLAVSGGDNKVSLWKENLRGEWECVKEIEE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagtaataaccaatgcaggccatgatgatatgattcatgatgcagctttagat
tattatggtcgcagactcgcaacatgttcatcggatcgcaccgttaagatttttgaaatc
gaaggagaaacacatcgccttacagaaacactgaaaggtcatgaaggggccatctggtcc
atctcctgggcccatccaaaatacggcaacatcctcgcctccgcaggctacgacggaaaa
gtcctcatctatcgcgaaacctcctcagtctggacaaaaatttacgattttgcccttcac
accgcttccgttaattctctctcctggtgtcctcacgaatctggatgtcttctcgcatgc
gcttcctcagatggaaacgtatcggtcttagaattcaaagataattctatggatcacaag
attttccatgcacatggtattggtgtgaacagtgtttcttgggcaccatcttcgcagcca
ggtagcttggtgagcgccaatgcgggtggaaaggaggggggagttaggagatttgtcact
ggagggagtgataatcttttgaggatatggggatgggatcaggctagtttgagttataaa
gttgagggtgctccattacaagggcacggggactgggttagagatgttgcgtggagtcct
acggttttgcagaagacatccgcctcccaagacaaaaccgtcagaatctggacctcatcc
gcagccaatccaggccaatgggaatccaaagtcctacaattcgaacgcgaagtctggcgc
gtgtcgtggagtttaagcgggaatgtattagcagtcagcgggggagataataaagtttct
ctatggaaggagaacctaaggggcgagtgggaatgcgtcaaggaaatcgaggaatag
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