KEGG   Sclerotinia sclerotiorum: SS1G_12747
Entry
SS1G_12747        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K14004  protein transport protein SEC13
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03013  Nucleocytoplasmic transport
ssl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SS1G_12747
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    SS1G_12747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssl03019]
    SS1G_12747
   04131 Membrane trafficking [BR:ssl04131]
    SS1G_12747
Messenger RNA biogenesis [BR:ssl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SS1G_12747
Membrane trafficking [BR:ssl04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    SS1G_12747
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    SS1G_12747
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    SS1G_12747
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_RIG_2nd WDR55 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st EIF3I Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_EML Polysacc_synt_2
Other DBs
NCBI-GeneID: 5482418
NCBI-ProteinID: XP_001586172
UniProt: A7F572
LinkDB
Position
Unknown
AA seq 298 aa
MAQVITNAGHDDMIHDAALDYYGRRLATCSSDRTVKIFEIEGETHRLTETLKGHEGAIWS
ISWAHPKYGNILASAGYDGKVLIYRETSSVWTKIYDFALHTASVNSLSWCPHESGCLLAC
ASSDGNVSVLEFKDNSMDHKIFHAHGIGVNSVSWAPSSQPGSLVSANAGGKEGGVRRFVT
GGSDNLLRIWGWDQASLSYKVEGAPLQGHGDWVRDVAWSPTVLQKTSASQDKTVRIWTSS
AANPGQWESKVLQFEREVWRVSWSLSGNVLAVSGGDNKVSLWKENLRGEWECVKEIEE
NT seq 897 nt   +upstreamnt  +downstreamnt
atggcgcaagtaataaccaatgcaggccatgatgatatgattcatgatgcagctttagat
tattatggtcgcagactcgcaacatgttcatcggatcgcaccgttaagatttttgaaatc
gaaggagaaacacatcgccttacagaaacactgaaaggtcatgaaggggccatctggtcc
atctcctgggcccatccaaaatacggcaacatcctcgcctccgcaggctacgacggaaaa
gtcctcatctatcgcgaaacctcctcagtctggacaaaaatttacgattttgcccttcac
accgcttccgttaattctctctcctggtgtcctcacgaatctggatgtcttctcgcatgc
gcttcctcagatggaaacgtatcggtcttagaattcaaagataattctatggatcacaag
attttccatgcacatggtattggtgtgaacagtgtttcttgggcaccatcttcgcagcca
ggtagcttggtgagcgccaatgcgggtggaaaggaggggggagttaggagatttgtcact
ggagggagtgataatcttttgaggatatggggatgggatcaggctagtttgagttataaa
gttgagggtgctccattacaagggcacggggactgggttagagatgttgcgtggagtcct
acggttttgcagaagacatccgcctcccaagacaaaaccgtcagaatctggacctcatcc
gcagccaatccaggccaatgggaatccaaagtcctacaattcgaacgcgaagtctggcgc
gtgtcgtggagtttaagcgggaatgtattagcagtcagcgggggagataataaagtttct
ctatggaaggagaacctaaggggcgagtgggaatgcgtcaaggaaatcgaggaatag

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