Sclerotinia sclerotiorum: SS1G_12833
Help
Entry
SS1G_12833 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03420
Nucleotide excision repair
ssl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SS1G_12833
03430 Mismatch repair
SS1G_12833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_12833
Enzymes [BR:
ssl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SS1G_12833
DNA repair and recombination proteins [BR:
ssl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SS1G_12833
MMR (mismatch excision repair)
Other MMR factors
SS1G_12833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
Motif
Other DBs
NCBI-GeneID:
5482391
NCBI-ProteinID:
XP_001586255
UniProt:
A7F5F5
A0A1D9PVA7
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MTIDNLLIGLNASQRAAVSSQADTLAILAGPGSGKTHTLTSRTAWLLHQGLQPWNIIVAT
FTVKAAREMKERIGKLIGNGTESKLILGTFHSIARRYLARYGHLIGIRKDFGIADSSDSL
AIIKRIVKRQDLNIDPKVARSRISSLKAKGSASASKPFDAKGKTVDAQEFEIVHAEYQAT
LELSNLLDYDDLLVRCVELLRLHPSCVSNIEAVLIDEFQDTNLVQFDLMRLLAAYQKRIT
IVGDPDQSIYSFRAAEIKNYKRMLRQYPDTVTISLEENYRSSGAILLTALNVIEQDSSRI
AKSLLPTHIVGTRPVLRKLATAQKEAEWIIQEIQRTMGMTGDLLDLNDFAILLRSSSLSR
VIESSLGKAGIAYRMVGGLRFYDRVEIKTLLDYLRVINLPDNNDALARIINTPSRRIGET
TIKSLLEEAEQSKMTLWALILDSVQGRRRTKTKLTTSVGKSLSIFVDIILTGMKKIADPL
SRENSIVKIMEFIIEKISYEKWLELQHGDIHKARWDNVKELIAQATDFQGLISNGYEDDS
LPKIDGLEQEDASDSLTQFLANVALASEVKKEDDQGSSTPQITISTIHAAKGLEWPIVFI
PGAYQGSMPHSRAEDTDEERRLLYVAMTRAKALLNMSCPLKNSLDELTTTCPFLSARGLR
AHLDQKGPPLRSNTVQCLAQILRRPFPTKESIAESSACLELTEDTYYSLEPENDKQDESK
WNFGNGNPNFTKGQRPPKRRRVDTTDQMGNVSGVVYSNTPMTTMERVSNFTLGGGFVSAG
SHLQVLGEQSSNQTIGEARSASTKGTIKSSKISSKGPPNGQGTLLGFLGKQEPQKEIKSA
PIVDEFRETKIRASVQLHRHRNNTPAEVMQSPSQNDGETLPPLLTGHRLGTGAALSRPNN
NRIEGKQNDSYIFLSSSPSRAKKPSTNFEPVPDAPVPGLTAKPAIMSLVRPARTLHTTSM
AIAQGSGGVRKTLGVKRSMNGWGSRTTQPFVPPTRKREN
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgactattgataatcttctcataggtcttaatgcctcacaaagagccgcagtttcatcg
caagcagatactctcgctatattagcaggaccaggaagcgggaaaacacatactttaacg
tcgcgaactgcttggctattgcaccaaggattgcaaccatggaatataattgtggcgaca
tttacagtcaaggcggctcgagagatgaaggaaagaattggaaagctgatagggaatggg
acggaatctaaattgatattgggaacatttcacagcattgcgcgacgttacctggcacga
tatggccatttgataggaattcgaaaagacttcggaattgcagactcgtccgattctttg
gccataattaaaaggattgtgaagcggcaggatttgaatatagaccctaaagtcgctcgg
tctcgcataagctctctgaaagcaaaaggttccgcatctgcgagtaaacccttcgatgcc
aaggggaagacagtagatgcacaagaatttgagattgttcatgctgaatatcaagcgacc
ttagagctttcaaacttgcttgactatgacgatcttcttgtacgatgtgtcgagctttta
cgacttcacccttcctgcgtatccaatatcgaggccgttttgattgacgaatttcaagac
acaaaccttgtgcaatttgatctcatgcgattacttgctgcatatcagaaacgaatcacc
atcgtcggcgatcccgatcaaagcatatatagctttcgagctgccgaaattaaaaactac
aaacggatgcttagacaatacccggatacggttactatctcattggaggaaaattaccgt
tcatcgggcgccatacttctcacggcactgaatgtgattgagcaagactcatccagaatt
gcaaagtctcttctgcctactcacattgttggcacacggccagtgctccgcaagcttgca
acggctcagaaagaagctgaatggattattcaagaaatacaaaggacgatgggcatgacg
ggtgacctgctagacttgaatgatttcgctattttgctacgatcttcatcactctcacga
gtcatcgaaagctcgctaggaaaagcgggtatagcctatcgcatggtcggtggtcttcga
ttttacgaccgtgtagagattaaaacgttattagattacctaagagtgattaatctacct
gacaataacgatgctttggcaagaattattaatactccttcacggcggatcggcgagacg
acgataaaatctttgcttgaggaggcagagcaatcaaaaatgacactttgggcactaatc
cttgattccgtgcagggaaggcgcaggacgaaaaccaagctcacaacatcagtcggaaaa
agcctttctatctttgttgacatcatattgacaggcatgaagaagattgctgatcctctc
agccgtgaaaactcaatcgtaaaaattatggagtttatcattgaaaaaatatcttacgaa
aagtggctggagttacaacatggtgacattcacaaggcgaggtgggacaacgtgaaggag
cttatcgcccaggccacggattttcagggattaatatctaatggttatgaggacgactct
ctcccaaagattgatggtctggagcaagaggacgcttccgattccctcactcaattttta
gcgaatgtagcattggcttcggaagtgaagaaggaggatgaccaaggaagtagcacaccc
caaattactatatctaccatacatgctgctaaaggccttgaatggcctatagttttcatt
cctggggcatatcaaggctctatgccacactctagagcagaggatactgacgaagaacga
agattgttgtacgtggctatgactcgggcaaaggctttgctcaacatgagttgccctttg
aaaaattcactagatgagttaacaacaacctgcccatttctttctgctagaggccttaga
gcacacttagaccagaagggccctcctctgcgttctaatactgttcaatgtctagctcaa
attttacgacgaccatttcctaccaaggagtcgattgcagagtcttccgcttgcctcgaa
ctcactgaggatacatactactccttggagccggagaatgacaaacaagatgagtccaag
tggaatttcggtaacggcaatcccaatttcaccaagggtcagcgaccacctaaacgtcga
cgggttgatacaacggaccaaatgggaaatgtttccggcgtagtctatagtaataccccc
atgacaacgatggaaagagtatcgaactttaccttgggtggtggctttgttagtgctggc
tctcatcttcaagtccttggcgaacaatcatcaaatcaaaccattggtgaagcgagatca
gcttcaacaaaaggaaccattaaaagctctaaaatttcatctaaaggtccacctaatggg
caaggcacactcttgggctttctcgggaagcaagagccacagaaggagattaagtcagca
ccaatagtcgatgagtttcgggaaacaaagatcagggctagtgtgcaactacatagacat
cgaaataacactcctgcagaagtgatgcaatcgccatcgcaaaatgatggcgaaactctt
ccacctcttcttacaggtcaccgcctaggaacaggtgcagccctatctcgaccaaataat
aatcgaattgaaggaaagcagaatgatagctatatcttcctgtctagctctccatcaaga
gcaaaaaagcccagcactaattttgagccggtgccagatgctcccgtccctggtctgaca
gcaaaaccagcaattatgtcgttagttcgtcccgcgagaacattacataccacgagtatg
gcaatagcacaaggttcgggtggtgtaagaaagactcttggtgtcaaaaggagcatgaat
ggctggggtagtcgcacaacacagcctttcgttcccccaaccaggaaaagagagaactag
DBGET
integrated database retrieval system
