Sclerotinia sclerotiorum: SS1G_12840
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Entry
SS1G_12840 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K04646
clathrin heavy chain
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl04142
Lysosome
ssl04144
Endocytosis
ssl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SS1G_12840
04142 Lysosome
SS1G_12840
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
SS1G_12840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_12840
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssl04147
]
SS1G_12840
Membrane trafficking [BR:
ssl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
SS1G_12840
Exosome [BR:
ssl04147
]
Exosomal proteins
Proteins found in most exosomes
SS1G_12840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_14
TPR_Vps41
Vac14_Fig4_bd
Motif
Other DBs
NCBI-GeneID:
5482351
NCBI-ProteinID:
XP_001586262
UniProt:
A7F5G2
LinkDB
All DBs
Position
Unknown
AA seq
1689 aa
AA seq
DB search
MGPLPIKFTELLQLTSVGVEAQSIGFNSCTLESDSYICVREKKNEAAQPEVVIVDLKQNN
AVTRRPIKADSAIMHWSKQVIALKAQSRTLQIFDLGAKAKLKSATMNEDVVFWKWFSETS
LGLVTDTTVYHWDVFDPNQAAPVEVFKRNPNLSGCQIINYRVSGDGKWMVVVGITQQQGR
VVGAMQLYSKDRGISQAIEGHAAAFGTLRLESAPADTKVFTFSVRTATGAKLHIVEVDHQ
SSNPPFSKKAVDVYFPAEAVNDFPVAMQVSQKYSIIYLVTKYGFIHLYDLETGTCIFMNR
ISSETIFITAGDSESAGLVGVNRRGQVLSVSVDETTIIPYLLQNPANSGLAVKLASRAGL
PGADNLYANQFEQLLAAGNYSEASKIAANSPRGFLRTPQTIERLKSLPAVPGQLSVILQY
FGMLLDKGSLNKHETLELVRPVLAQNRKHLLEKWMKENKLDCSEELGDIVRQQDTQLALA
IYLKANVPHKVVAAFAESGQFEKILPYAQQAGYQPDYVQLLRNIISINPEKGAEFATQLA
NTEGGSLVDIERVVDVFQSQGMVQPATGFLLDALKENKPEQGHLQTRLLEMNLMNAPQVA
DAILGNEMFSHYDKPRIAQLCEQAGLAQRALEHYEDPEAIKRVIVNIVASPTFSQEWLTG
YFGRLSLEQSLDCLDAMLKVNIRQNLGAVVQIAVKYSDLLGPVRLIDLFEKYKTAEGLYH
YLGSIVNLSEDPDVNFKYIEAAVKMQQYQEVERICRDSNSSDPLKVKNFLKEAKLTEQLP
LIIVCDRFNFIHELVLYLYQNQQFQSIEVYVQRVNPARTPAVVGGLLDVDCDEQIIKNLL
NSVNHASIPIDELVQEVESRNRLKLLLPFLEATLAAGNQQQALHNALGKIFIDSNNNPEQ
FLRTNDMYDCKVLGTYAAKRDPSLAIIAFSKGQNDLELVNITNENSMYKAQARYLLERAD
NELWGFVLSENNIHRRSVIDQVISTAVPESTEPEKVSVAVAAFLSADLPGELIELLEKIV
LEPSPFSDNESLQNLLILTATKADKSRVMDYIHKLDAYNPVDVASICIEVGLYEEAFEVY
KKINDHINAVNVLVEHIVSIDRAQDFAEQVEIPEVWSRVAKAQLDGLRVSDGINSYLRAN
DPSNYLEVIEIATHAGKDEDLIKYLRMARKTLREPAIDTGLAFAFARTDQLSELEDFLRG
TNVADIEESGDKAYAEGFHQAAKIFFTSISNWAKLATTLVHLEDYQSAVECARKANNIKV
WKQVNAACVEKKEFRLAQICGLNLIVDAEELQSLVKQYERNGYFDELIALLEQGLGLERC
HMGIFTGLGIALSKYHPDRTMEHLKLFWSRINIPKMIRACEEAHLWPELIFLYCHYDEWD
NAALAMMERAADAWEHHSFKDIIVKVANLEIYYRALNFYLQEQPSLITDLLQALAPRIDV
NRVVKMFEKSDNIPLIKPFLLNVQTQNKKIVNVAINDLLIEEEDYKTLRDSVENYDNYDA
VELAQRLERHDLVFFRQIAANIYRKNKRWEKSIALSKQDKLFKDAIETAAISGKSDVVEE
LLRYFVDIGSRECYVGMLYACYDLIPVHVVMEVSWRHSLTDFTMPFMINYLAQQSSTIAE
LKKDNEERKLREKSQVQEEDNTPILGGNRLMITAGPTGHKSEMSCTVTCTVMAKNANSAL
GELRRCRYV
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgggtccactcccaatcaagttcacggagcttctccagttaacaagtgtcggagttgag
gcgcaatcgataggttttaattcatgtacactggagtcagattcatacatctgcgtacga
gagaagaagaacgaagccgcgcaaccagaagtcgtcatcgtcgatctaaagcaaaacaat
gctgtcacccgaagacctatcaaggcggatagtgccattatgcactggtcgaaacaggtc
atcgcattaaaggcacaatcaaggaccttacaaatatttgacttgggtgccaaggcgaag
ctaaagtctgctaccatgaatgaagatgttgtcttctggaaatggttcagtgagacaagc
ttgggattggttaccgacacaacagtttaccactgggatgtttttgacccaaatcaggca
gctccggtggaggtcttcaagagaaatccaaacctttctggatgtcagatcatcaactat
cgtgttagtggtgatggcaagtggatggtagtcgtgggcattacacaacaacaaggacga
gtggtcggagcgatgcaactatattcgaaagacagaggcatcagtcaggccatcgagggc
catgccgcagcatttggtacactacgattagaatctgcgccagcagacacgaaagtgttc
acattttcggttcgaactgctactggcgcaaagctacacatagtcgaggtcgaccatcaa
tcttcaaatccaccgttttcaaagaaagcagttgatgtatattttcctgctgaagctgta
aacgatttcccagtcgccatgcaagtttcgcaaaaatacagcattatttatttggttacc
aaatacggctttattcacctatacgatcttgagactggtacatgtattttcatgaaccgc
atctcaagcgagacgatcttcattacagccggcgactcggaatccgctggacttgttggt
gttaaccgaaggggacaagtactgtcggtatctgttgatgaaacaacaattattccgtac
ttgctccaaaatcctgcaaactctggcttagcagtcaagcttgcctcaagagccggtcta
cctggtgcagacaacctctatgccaaccaattcgagcaacttttggctgccggaaactac
tctgaggcttcgaaaatcgcggcaaactctccccgcggctttttgcgaactccacaaact
atcgaacgtctcaagagcttaccggctgtgccgggtcaattatccgttatcttacaatac
tttggtatgctgcttgacaagggatcgttgaataaacatgagacgttagagcttgtacga
cctgttttggctcagaatcgaaagcatcttcttgaaaagtggatgaaggaaaacaaactc
gactgttctgaagaattgggtgacattgtccgacaacaagatacacagcttgcactcgct
atctatcttaaggcaaatgttccccacaaggttgttgctgcattcgccgagagtggtcaa
ttcgagaagatcttaccttacgcccaacaagcaggttaccaaccggactatgtccaatta
ctccgcaatattatctctatcaaccctgaaaagggagccgaatttgctactcagttggca
aatactgaagggggatctctagttgacattgagcgtgttgtagacgtatttcagtctcaa
ggaatggttcaacccgctactggattcttgcttgatgcattaaaggagaacaagcctgag
caaggacacttgcaaactcgcctccttgaaatgaatctcatgaatgcccctcaagtcgct
gacgccattcttggcaacgaaatgttctctcactacgacaagcctagaatcgcgcagcta
tgtgaacaagctggccttgctcaaagagctttggaacactatgaagaccctgaggctatc
aaacgtgtcattgtcaatatcgttgcatccccaactttcagtcaagaatggctcaccggt
tactttggtcgcttgtcccttgaacagtcattagattgtcttgatgctatgcttaaagta
aacattcgtcaaaacctcggggccgttgttcagattgccgtgaaatactcggatttactc
ggccctgttagattgatcgatctttttgagaagtacaagactgctgaaggtctataccac
tatcttggtagcattgtcaatctgagtgaggacccagatgtaaacttcaaatatattgag
gctgccgtgaagatgcagcagtaccaggaggttgaacgtatatgccgtgacagtaattcc
tctgatccgcttaaagtcaaaaacttcttgaaggaggccaaattgaccgagcaattgccg
ctgatcatcgtctgtgatcgattcaacttcattcatgagttggtactttacctctatcag
aaccaacagttccaatctatcgaggtctatgtccaacgagtcaaccctgcacgaactcct
gctgtcgtcggtggattactcgatgttgactgcgatgagcaaatcatcaagaatcttttg
aattccgttaatcatgcttccatccctatcgatgagcttgttcaggaggttgaatcccgc
aaccgtcttaagctcctgttgcctttcctcgaggccaccttggctgcaggcaaccagcaa
caagctttacataacgcgctcggaaaaatctttattgatagtaacaataacccagagcaa
ttcctcaggacaaacgatatgtacgattgcaaggttttgggtacctacgcagctaagcga
gacccgtcgcttgctattatcgcatttagtaaaggtcagaacgatctcgaactcgtcaac
atcaccaacgaaaattctatgtacaaagctcaagctcgctaccttttggaaagagctgat
aacgaattgtgggggtttgtcttgtctgaaaacaatattcaccgccgatctgtgattgat
caagtcatatctacagctgttccagagtcaactgagcccgaaaaggtttctgttgcagtt
gcagccttccttagcgctgatcttccaggtgaattgattgaattgcttgagaagatcgtt
cttgagccttcgccattcagcgacaatgagagcttgcagaatcttctcattctcaccgcc
accaaagctgataagagtcgagtcatggattatattcacaagttggatgcgtataatcct
gtggatgtcgcttcaatctgcattgaagttggcttatatgaggaggcattcgaggtttac
aaaaagattaatgaccatattaacgctgtcaacgtcctcgttgagcacattgtcagcatc
gatcgcgcacaagattttgcggaacaggtggagattcctgaagtatggagtagagtcgct
aaagctcagttggatggtctacgtgtttccgacggtatcaatagctatctccgagcaaac
gatccaagtaactacctagaggttattgaaattgctactcacgctggcaaggacgaagac
ctcatcaaataccttcgcatggcccgtaagacacttcgtgagcctgctatcgacactgga
cttgcctttgcatttgctcgtactgatcaattaagcgaacttgaggacttcctcagggga
actaatgtcgctgatattgaagagtcgggtgacaaggcatatgctgaagggttccaccaa
gctgcgaagatcttcttcaccagtatttcaaactgggccaaacttgccaccactcttgtt
cacctcgaggattatcaatccgccgtcgaatgcgcaagaaaggctaataatatcaaggtc
tggaagcaagtcaacgccgcttgtgttgagaagaaggaattccgtcttgctcagatttgt
ggtctcaatttgatcgttgatgctgaagagttacaaagcttggtcaagcaatacgagcgc
aacggctacttcgatgaacttattgcattacttgagcagggtctaggtcttgaacgatgt
catatgggaatttttacgggactaggtattgctctttccaagtaccatccagatcgcaca
atggagcacctgaagcttttctggagtagaatcaatattccaaagatgattcgtgcctgc
gaggaagcccacctttggccggaattgattttcttgtactgccattatgatgagtgggat
aacgctgctcttgcaatgatggagagagctgccgacgcatgggagcaccactctttcaag
gatatcattgtcaaggtagcaaatttggagatctactaccgcgctctgaatttctatctt
caagagcaaccatctctcattaccgatcttctacaggcacttgcaccaagaattgacgtc
aatcgtgttgtcaagatgttcgaaaagtctgacaacatccctctcatcaagcctttcctt
cttaacgttcaaactcagaataagaagattgtcaacgtggccatcaatgatttgttgatt
gaggaggaagactacaagactctccgtgattctgttgagaactacgataactatgatgcc
gtcgagcttgctcaacgattggagcgtcatgatttggtcttcttccgccaaattgctgct
aatatttaccgcaagaacaaacgctgggagaagtcgatcgctctttcaaagcaagacaag
cttttcaaagatgcaattgagactgctgctatctctggcaagtcagatgttgtcgaggag
ctgcttagatatttcgtcgatatcggtagccgagaatgttatgttggtatgctctatgct
tgctatgatctcatccccgtccatgttgtcatggaagtctcatggcgtcacagccttaca
gattttaccatgccattcatgattaactatttggcccaacaaagctctacgattgctgag
ttaaagaaggacaatgaggagaggaagttgagagaaaagtcacaggttcaagaagaggac
aatacccccattctcggaggcaatcgtcttatgatcaccgctggaccgaccggacataag
agtgagatgtcctgcactgtgacctgcactgtgatggccaagaatgccaattctgcactt
ggcgagttgaggcgatgtagatatgtgtag
DBGET
integrated database retrieval system