KEGG   Sclerotinia sclerotiorum: SS1G_13464
Entry
SS1G_13464        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03013  Nucleocytoplasmic transport
ssl03015  mRNA surveillance pathway
ssl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SS1G_13464
  09122 Translation
   03013 Nucleocytoplasmic transport
    SS1G_13464
   03015 mRNA surveillance pathway
    SS1G_13464
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssl03019]
    SS1G_13464
   03041 Spliceosome [BR:ssl03041]
    SS1G_13464
Messenger RNA biogenesis [BR:ssl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     SS1G_13464
    TREX complex
     SS1G_13464
Spliceosome [BR:ssl03041]
 Complex C
  Other components
   EJC/TREX
    SS1G_13464
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    SS1G_13464
SSDB
Motif
Pfam: RRM_1 FoP_duplication Smg4_UPF3 RBD_DEAH11 DUF1180
Other DBs
NCBI-GeneID: 5481721
NCBI-ProteinID: XP_001585580
UniProt: A7F784
LinkDB
Position
Unknown
AA seq 324 aa
MSSDKLGQSLDEILATQRASGAGRGGRGGRRGGRPSGGRNATAAPVGGVSKSKKPVKGSV
KPAPTGPSGGNAPSRIVVSNLPYDVTEQQIKLLISNLAQTNDGEYFHEAKLHTKSVQLVY
GPNGASRGEANITFHRPGDAAAAVSKLNGVKVDNRSLRVQLLVDAQAAAAFEEKAAKRLM
DRISSTPKPQPKSAVPNKANGKDQGSKRGGKRGSRGSIARPAKKTAEELDLEMADYWESG
NAAGGETGGDNQAANSTVQPAANGDANMDDEILVCTTKIVLASPVRIFTGEEATVLKILP
HPAPTTYFTLMLIVLLLLPHAFFL
NT seq 975 nt   +upstreamnt  +downstreamnt
atgtcttctgataaacttggccaatctcttgacgagattctcgcaactcaaagagcctca
ggtgcaggtcgaggtggtcgcggcggtcgtcgtggtggtcgtccttcaggtggtcgtaac
gccaccgcagctccagttggaggcgtatcaaagagcaagaagccagttaagggttcagta
aagcctgctccaaccggtccttctggcggaaatgccccatctcgtattgtggtcagcaac
ctgccatatgatgtgactgaacagcagattaagctcctgatttcgaacttggcgcagacg
aatgatggcgaatactttcacgaagcaaaattgcacaccaaatccgttcaattagtatac
ggtccaaatggagctagccgcggtgaggccaacatcaccttccatcgtccaggtgatgct
gctgcagctgtatcaaaacttaatggtgtcaaggttgacaatagatcattgagggttcaa
ctgcttgttgacgcccaggctgctgctgctttcgaggagaaggccgcgaagagactcatg
gaccgcatttcgagcacaccaaaaccacaaccaaagtccgcagtgcccaacaaggcaaat
ggcaaggatcaaggatccaagagaggtggaaagagaggttcccgtggctctatcgctcgc
cccgccaagaagactgccgaagagctcgatttggagatggcagattattgggagagtgga
aatgccgcaggtggagagactggtggtgacaaccaagctgcgaattctacagttcaacca
gccgctaacggagatgcaaacatggatgacgaaatcttggtatgtacaactaaaatcgtt
ctcgccagccctgtaagaatatttacgggggaagaagcaactgtattgaaaatacttccg
catcctgctccaactacctactttacgcttatgttgattgtattactgctgcttcctcac
gctttctttctgtga

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