Sclerotinia sclerotiorum: SS1G_13536
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Entry
SS1G_13536 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K24155
rabconnectin-3a
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
SS1G_13536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_13536
Membrane trafficking [BR:
ssl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
SS1G_13536
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
SS1G_13536
RAVE complex
SS1G_13536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
5481672
NCBI-ProteinID:
XP_001585652
UniProt:
A7F7F6
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MSKLRFAFIIDGKDFTVATEHAVQERAATDSEDDHALAHLIEVANRNPEVCVVLDEHGHL
SAWGLENVGSKIKQPTNIFNIAHIDGVELCLPTELAEDTSYVQLYNFCNQSGGNLNVLVH
HFDGKIEFFETDVANLFDPSPRTQRLKSKALWTGHSGPVKKIVRNVSGRAVVSRTDGNES
IVWKHMEHAGGTSVFRQSIISQTEHVHRICVMRKGNFVIYLHHDHITLWDTRHSAAVKLA
DCKFSVMGKPLCILMLPEVNKEGPVAHVATITSKMKGIVWEVKLPQRRESLQINGDHQEA
SIREFCQFDLGDNDDLAYVLPVDPAGSPPVISGFLDTFARDIAISYTHSGLLRSWTARID
FEKEKVDWLQTCSVDTGISEPALASGSSLRKAALVNSTRSELTIWDVRGARLEYSQDYES
QDTIQDLDWTSTPDDQSILAVGFRYRVVLLAQMRYDYLDKGPAWAAIREVNIRDLTAHPI
GDSTWLGGGNFIVGAGNQLFVYDKEVDSSASIVLPYRKTPWDLFDIVSRLNGPLPVYHPQ
FLSQYILAGKNLLVQHILLALYKILKYYIEGEAIDSHLGMNIEDFYIGSVNVSSASKGIR
SAFDGLSDDDEVETVTEDVAASITEKLTQIALPQLSRQEQIHLADIVECVGIVERQRRSM
DDNAARFMLFFRQHVLRRGRANELSLSWREINWAYHSNSQDILADMVSRQFHGRMLWEHA
RESGIFMWMTDANALKAQFEVIARNEYTKNDLKNPIDCSLYYLALKKKAVLQGLWRMAAW
NREQGATTRLLANNFSEKKWRTAAMKNAYALLGKRRFEYAAAFFLLADCLKDAINVILSQ
LKDLQLAIAVTRVYEGEHGPILKELLEEKVLPLAAQEGNRWLASWAFWMLHRRDMAVRAL
ISPVYTLLESPQSPDLQAKLFLTDDPALVVLYSQLRQKTLQTLRGASKVTPKVEWAFVLH
NSRLYDRMGCDLLALDLVRNWEFMLPTKLDFKSFDGEINPRKMLRRRSSLVVADLPISGI
GPAAADTKDAIVIHGPNS
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagctaaggtttgcatttatcatcgatggaaaagattttacggttgctacagaa
catgccgtacaggagagggcagcgactgactcagaggacgaccatgccttagcgcatttg
atcgaggttgcgaatcgtaatccggaagtttgtgttgtactggatgaacatggacatcta
tctgcatggggcctggaaaatgttgggtctaaaataaaacaaccaacgaatatttttaac
attgcacatatcgatggtgtggaattgtgtttaccaacggaactggccgaggataccagc
tatgttcagctctataatttctgcaaccagtctggcgggaatctcaatgttctagtccac
cattttgatggtaaaattgagttttttgagactgatgtagccaatttgtttgatccttca
ccaagaacgcaacgcctcaaatcgaaagcactatggacgggtcattcaggtcctgtcaag
aaaattgtgcgtaatgttagtggacgagcagtagtatctcgcacagatggcaatgaaagt
atagtttggaagcatatggaacatgcgggcggaacctcagtatttcgtcaaagtatcatc
tcacaaactgagcatgttcataggatatgtgttatgagaaaaggaaatttcgtgatatat
ttacaccacgatcatattactctgtgggatacaagacattccgcggcggtcaaactagcg
gactgtaagttttctgtcatggggaagccgctgtgcatactcatgctacctgaggtcaat
aaggagggtcctgtcgctcatgtcgctacaattacatcgaagatgaagggtattgtatgg
gaggtcaagctgccccaaaggagggaaagtcttcaaatcaatggggatcatcaagaagct
tccattcgtgaattctgtcaattcgaccttggagacaatgacgatttagcatatgtttta
cctgtggatccagctggatctcctcccgtcatctccggatttttggacacttttgcgaga
gatattgctatctcctatacgcattctggacttttaagatcttggaccgcccggattgac
ttcgaaaaagaaaaggttgactggctacagacttgttcggtagacacaggtatcagcgag
cctgctctagctagtggaagctctttacgaaaagctgcactcgtgaactcaactagatct
gagttaacaatatgggacgtccgaggtgcccgacttgagtattctcaggactatgaatcc
caggatacaattcaggatctggattggacttcaactccggacgatcaatccattcttgct
gtaggcttccgttatcgagttgtattattggcacaaatgcgatacgattatttggataaa
gggccagcctgggcagcaattcgagaagttaatattcgagatttgacagcccacccaatt
ggtgattcaacctggttaggaggtggtaacttcattgttggagcaggtaatcagttgttc
gtttatgataaggaggtcgactcgtcagcatcaatagtcttaccttaccgcaaaactcct
tgggacctctttgacattgtttctagattaaacggcccacttccggtttatcatccacaa
ttcttgagccaatacatacttgccggcaagaatttattagtgcagcatattttgttggca
ctatacaagatccttaaatattacattgagggtgaagcaatcgactcacacctcggaatg
aacatagaagatttctacattggctcggtcaatgtgtcttcggctagtaaaggaattaga
tctgcatttgatggcctttccgacgatgacgaggtggagacagttacggaagacgttgct
gcttccataacagagaaattgacgcagattgcgctgcctcagctttcgaggcaggaacaa
attcacctggctgatattgttgaatgtgtcggtattgttgaacgtcagcgtagatctatg
gatgacaatgctgcaagatttatgctattctttaggcagcatgtcttacgtcgtggtcgt
gcgaatgagctgagtctgtcttggagggagatcaattgggcataccatagtaatagtcag
gatatcctggcagatatggtctcacgacaattccatggaaggatgctttgggaacatgca
cgggagagtggtatctttatgtggatgacggatgcaaatgctctgaaagctcaatttgaa
gtcattgcacggaatgaatacacaaagaacgatctcaaaaaccccatagattgcagtttg
tattatcttgcgctgaagaaaaaggcggtacttcaaggtctatggcgcatggctgcgtgg
aatcgtgaacaaggcgctacgacaagactcctagcgaataatttttctgaaaagaagtgg
cggactgctgcaatgaagaatgcatatgctttgcttgggaagcgtcggtttgaatatgct
gcggctttcttcttattggcagattgcctcaaagatgccatcaacgtgattctgagtcag
ctcaaagatcttcaacttgcgatagcagtcacccgtgtatatgagggtgaacacggtcct
attctcaaagaacttcttgaagaaaaggttctgccattagctgctcaggaaggtaaccga
tggcttgcatcgtgggctttctggatgctgcatcgtcgtgatatggctgtgcgagccttg
atctcgccagtttacactctacttgaaagtccacaatcacctgatctccaagcaaaactt
ttcctaaccgatgatcctgctctagttgttctttactcgcagcttcgtcaaaagacctta
cagaccctacgtggcgcatccaaagtcactccaaaggtcgaatgggctttcgtattgcac
aattcaagactatatgatcgcatgggctgtgatttattggcattggatttggtgaggaat
tgggagttcatgctcccaaccaaactagactttaagagtttcgatggtgaaataaatccc
agaaagatgttgagaagaaggagctcgctagttgtggccgacttgcctattagtggaatt
ggaccggcagcggcggatacaaaagacgcaatagttatacatggcccaaactcataa
DBGET
integrated database retrieval system