KEGG   Sclerotinia sclerotiorum: SS1G_13568
Entry
SS1G_13568        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K15542  polyadenylation factor subunit 2
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SS1G_13568
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssl03019]
    SS1G_13568
Messenger RNA biogenesis [BR:ssl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SS1G_13568
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I DSE1_N Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR75_1st ASA1 Beta-prop_NOL10_N WD40_RFWD3 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_RIG_1st MIOS_WD40 Beta-prop_WDR75_2nd PEP5_VPS11_N PAC11 Beta-prop_ACSF4 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 5481414
NCBI-ProteinID: XP_001585329
UniProt: A7F7I8
LinkDB
Position
Unknown
AA seq 616 aa
MAYEPREYGGGRDRDRDREGRGRRDDGATGEGGGNEGSFVRGRGRRPVTDYSSTMVHWMR
NRQPRYKGGYQGEMERPSPSYMIDMLPPLARLHNAADSVPGRHLHSSLNKIKHPVNVVRW
TPEGRRLLTASSSGEFTLWNGAGFNFETIMQAHDVAIRALSYSHSDDWLISADHDGVIKY
WQPNFNNVKVIQGHDDPIRDLAFSPNDSKFVTASDDSTLKIFDFAGGVEESTLSGHGWDA
KSVDWHPTKGLLVSGSKDHLVKLWDPRTGRCLTTLHGHKNTITKTVFEPVRGYCLATSAR
DQTARVFDLRMMRDVCLLKGHEKDISTLAWHPIHPSLLSTGGADGSLFHYLLDEPNNPPG
TEPSIAPYDSPDPTTTPAQTIYPAHKLTYAHEFAIWSLDWHPLGHILASGSNDRITRFWT
RVRPGDIDTFKDRYHIGDSAAEAQGTYDRRGGRRQRQEEEDQEAEDEMEGLVDQKMPAKL
PGFATGIPGLPLPGMGVIPGMNRVPPPPPPMLSGGNIPPPPLPGNLDANTLALMMKAGLP
PPGATGMPPPPPMLPPNFQLPPGFVVPPPPPGMPMPGLENADLSSNGGGIRKRGPLPSQE
ESLQAMQRQGKFRPPR
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggcatacgaacctcgcgagtatggaggtggtcgcgatcgggatcgggatagggaggga
agaggaagaagagatgatggggcaaccggagagggaggcggtaatgaagggagttttgtg
aggggacgaggtcgtcgtcctgtcactgactatagctctaccatggttcattggatgcga
aatcgtcagccaaggtacaaaggtggttaccaaggcgagatggaaagacctagtccgagc
tacatgatagatatgttaccaccattagcaagacttcataatgcagcagattcagtacct
gggagacatctacattcgtcacttaataagattaagcatcctgtcaatgtggtaaggtgg
acaccagaaggtcgacgattgctcacagcctccagtagtggagagtttactttatggaat
ggcgcgggctttaacttcgagacaattatgcaagcacatgatgttgctatccgagccttg
tcttattcccatagtgatgactggttgatatcagctgatcacgatggagtgatcaaatac
tggcagcccaattttaacaatgtcaaagtcattcaaggacatgacgaccctataagggat
ctcgcatttagtccgaacgactcgaaatttgtcacggcctccgatgactctacgctaaag
attttcgattttgctggcggtgttgaggagtccactctctctggtcatggatgggatgcg
aaaagtgttgattggcatcccactaaaggattacttgtttctggatcgaaagatcatctt
gtcaaattatgggatccgcgtactggacgatgtttgacgactcttcatggacataagaat
actatcacaaaaaccgtctttgaaccagttcgaggctactgcttagccacttccgctcga
gatcaaacggcacgagtatttgatttgcgtatgatgcgcgacgtatgcttgcttaagggg
catgaaaaggacatctctaccttagcatggcatcctattcacccttccctcctaagtacg
ggtggtgctgatgggtctctattccactacctgttagacgagcctaataatccccctgga
actgaaccgtctatagctccttatgatagcccggatcctactactacaccggctcaaact
atctatccagctcacaaactaacatacgctcatgagtttgccatttggtcgcttgattgg
catcctcttggtcatattttagcatcagggtcgaatgatagaatcactcgcttttggaca
cgtgtgcgtcctggtgatattgatacattcaaagaccgctatcacattggcgactcggct
gccgaggcgcaaggaacctatgatcgtcgcggcgggcgacgtcaacgtcaagaggaggaa
gatcaagaagctgaagacgaaatggagggcttagtcgatcagaaaatgcctgcaaagcta
cccggtttcgccacaggaatacctggtctgccattacctggtatgggagtcattcctggt
atgaatcgtgttcctcctccacctcctcctatgctcagtggaggaaatattccaccgcca
cctttaccgggaaatttagacgcaaatactctagcacttatgatgaaagccggtttacct
cctcccggagcaacgggcatgccacctccaccgccgatgctcccgccgaactttcagctt
ccacctggtttcgttgttcccccacctcctcctggtatgccaatgcctggattggaaaat
gcagatttatcgagtaatggtggtggtatcagaaaacgaggaccattacctagtcaggaa
gaaagtttacaggcgatgcagagacaggggaaattcaggccaccacgataa

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