Sclerotinia sclerotiorum: SS1G_13629
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Entry
SS1G_13629 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
ssl03015
mRNA surveillance pathway
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_13629
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_13629
03015 mRNA surveillance pathway
SS1G_13629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_13629
03041 Spliceosome [BR:
ssl03041
]
SS1G_13629
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
SS1G_13629
Spliceosome [BR:
ssl03041
]
Common components
Common spliceosomal components
Cap binding complex
SS1G_13629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
5481563
NCBI-ProteinID:
XP_001585390
UniProt:
A7F7P9
A0A1D9QJA7
LinkDB
All DBs
Position
Unknown
AA seq
181 aa
AA seq
DB search
MPGSIRNTVDRLDKPSAYYQGRNKKRRYERDGEDDRRERTPEEPADDPLKDATTLYVGNL
SFYTTEEQIHELFAKCGEIKRLIMGLDRFNKTPCGFCFVEYYTHQDALDCMKYIGGTKLD
ERIIRTDLDPGFQEGRQYGRGKSGGQVRDEYREEYDEGRGGLGRAIQAERQKEEEEYGKG
R
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcctggctcaataagaaatactgttgataggctggataaacccagtgcctattatcaa
ggtagaaataagaagcgcagatatgagagagacggagaggatgatagaagagaacgaact
ccagaggaaccagcagatgatcctttgaaagacgcgacaacactttatgtgggaaatttg
tccttctacacaactgaagaacagattcacgaattatttgcaaaatgtggtgaaatcaag
agattgattatgggattggataggttcaataagacaccttgcgggttctgtttcgtggaa
tattatactcaccaggatgcacttgattgtatgaagtatattggtggcacaaagctcgat
gaacgaatcattagaacagatttggatcctggatttcaggaagggagacaatatggacgt
ggaaagtctggcggccaagtgcgcgacgagtaccgtgaagaatacgatgagggcagagga
ggtcttggtagagctattcaagccgaaagacagaaagaagaagaagaatatgggaaaggt
agatag
DBGET
integrated database retrieval system
