Sclerotinia sclerotiorum: SS1G_14013
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Entry
SS1G_14013 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_14013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_14013
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SS1G_14013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
DUF7234
Motif
Other DBs
NCBI-GeneID:
5481099
NCBI-ProteinID:
XP_001585153
UniProt:
A0A1D9QGG7
A7F8T2
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MALPGTPQRPLPGAYFMTPAPPRFNQPPSPQPPLFRPPQPHSGREPTPPRDGPIPPPIQA
QIIPQPLSPMSRAAKTINEVLQRESSFPDLDSYVKQGISSDYELPSPTSDPAWVPFQKIR
MYDIPDTIYDQYNNAAFGTSMGLFAELNHAWAAIDNALYLWDYTSPNPTLRGFEDQPNGI
RAVKLVVPRRGVFISAITHIVVVATTQDIILLGVANAVDEHGNRTLELYRTGMTLSIRGL
DVTVIEGSADTGRIFFAGGANQVYELTYQNEDKWFSNRTGKLNHTSPGYTSLVPIPWGRT
TTEVVVDMVIDDSRRLLYTLSSESTIRTFHMDSATTLTQVIEKKRQDVLRDISHMISPTP
LLSSHMRIVSISPISAREGIKLHLMATTTSGCRIFLSATRGYAYGFQSGQGAPQSMQVQH
IRFPPRLDRAGNRSYPGLEPAIETSSEALAHTRKGLRYPPGFFFCFVSKETRDGSDALFL
SAPDTGRIAAQARDMAVQQGLRYCESAFWLEMGSRAEAIGLVTKPFAASEQPLGFGNELA
TQYDLPTPEVAIMTNSGIHIVRRRRLVDIFASAIRSGFDDGETEIKKFIRQYGRGETTAT
ALAVACGQGGDASIVGERRIVDPDTIEAARRAFVEHGGRASMDQNMVVEGPTQAIENVRP
SSRHDGLALYMARLVRSLWKSPVIKLETSNQVVAIKPRISKKKLAAVQDELMKLSKFLED
NKTFIEGLSGPEGLNRVTSQQEDIALQGEHQALHSLQILNTSIVEGISFVQMFFEERVDD
IWAALDDTARKQLRELTFELLFSTDNGKNLAKLLVKEIVNRNIAQGSNVDTVAEALRRRC
GTFCSPDDVIIFRAQEQLQRATSVGPSTDHGRALLNESVRLFQEVAGVLSHDNLYSACSQ
FAANKFYAGAISLALLVAHESDRGNKALSWLNDGRPADDPRASFFHFRKDCYDIVKEILT
AVDNDTGNAPEMVDGRQSTPARMREEAHQVVDDSDDEVFQYDLFDWYLEQGWMDRIIATD
SPFIVKYLERTASESMENSDLLWRYYVHREDYSAAAGVQLTLAKSELPITLQRRIEYLSR
AKANAQTQGGAVHRQARQIMLHEAGELLDVANIQHELLQRLRADTRIPQARKDNVVADLD
GAIQPLSVLFNEYADQGQYYDICLQIFAAANHHNQADIKTMWEQLLQSIQARVEEDPQAQ
NERPYEAIVNIIREMSQKLSGYEIVFSPSILIPLVETYAAEHEHPGPLNWVPDLFLSVSF
DPDTIINILEGMFYNEVNPFVGPNRIVLANHIVYVAEQWYEDCLRHNKRVFGGEVQKDVI
GQLLADLSAAAYRDDPVGRQRIMELRRRIGLGGLR
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggctcttccggggacaccacaaaggcctttaccaggtgcatatttcatgacacctgct
cctccgagattcaatcaacctccttcaccgcaacctcctctatttcgaccaccgcaaccg
cattctggtcgtgagccaactccacctcgagatggtccaatacctcctccaattcaagct
caaatcataccgcaacccttatcacctatgtcgcgagctgcaaaaaccatcaatgaagtc
ctacaaagagaatcgagctttcccgacctcgacagttatgtcaagcagggcatttcttcc
gactatgaacttccatctcctacctctgatcctgcctgggttcctttccaaaagataaga
atgtacgatattcccgacacgatttacgaccaatacaataatgctgcttttgggacttca
atgggtcttttcgccgagttaaaccatgcctgggctgctatcgacaatgcgctatatcta
tgggactatacaagtccaaacccaacattacgaggattcgaagatcagccaaacggtatt
agagctgtgaaactggttgtaccgcgcagaggagttttcattagtgctattacgcacatc
gtggtggtcgcaaccactcaagacattatcttgttgggtgtcgcaaatgcagtcgatgag
catggaaatagaaccttggagctttacagaacgggcatgacgctatctattagaggacta
gatgtcacagtaattgaaggatcagcagatacggggcgcatattttttgctggaggagct
aaccaagtctatgaacttacatatcaaaatgaagataaatggttctcgaatagaacggga
aagctcaatcacacgagtcctggatacacgtccttggttcccataccttggggtcggacg
acgaccgaggttgtagtggatatggttatcgatgattcccgtcgcctgttatacaccctt
tcctccgaatccaccattcgaacattccacatggatagcgctactactttaacacaagtc
attgagaagaagcgacaagacgtcttgagagatatctctcacatgatttctcccacgcct
cttttgtcttctcatatgcgaatcgtctcaatcagtcccatatctgcaagggaaggaata
aagcttcatcttatggccactaccacatctggatgtaggatatttctcagtgcaactcgt
ggttacgcttatggtttccaaagcggtcagggtgctccgcagagtatgcaggttcaacac
atcagatttccgcccaggcttgatcgagctggaaacagatcttatccgggacttgaacca
gcaattgagaccagctccgaagctttagctcatacacggaaaggtctaagatatcctcca
ggtttcttcttttgctttgtttccaaagagacccgtgatgggagcgacgctctttttctg
tcagctccagatacgggtcgcatagcggcgcaagcgagagatatggccgttcaacaagga
ttgcgatattgcgaatcggcattctggctcgagatgggtagccgtgctgaggccattggt
cttgtgacgaaaccattcgctgcttcagagcaacccctaggctttggaaatgagctcgca
actcaatatgacttgcctactccggaagtcgctattatgacaaactctggaattcatatc
gttcgacgtcgacgtcttgtggatatatttgcctctgcaattcgaagtggattcgatgac
ggagaaacggaaattaagaagttcattcggcaatatggtagaggagagacaactgcgacc
gctttggccgttgcctgtggacagggtggtgatgcctcaatagttggagagaggaggata
gtcgacccagacacgattgaagctgcaagaagagcattcgtcgaacatggtggacgtgca
tctatggaccagaacatggttgtcgaaggacctacccaagcaattgaaaatgtacgacct
tcctcgagacacgacggactcgccctatatatggcgagattggtccgtagcctttggaaa
tctcccgttataaaattggagacaagcaatcaggtggttgccataaagccaagaattagc
aaaaagaagctagccgcggttcaggatgaacttatgaaattgtcaaaattcttagaggac
aacaaaacattcattgaagggctgtctgggcctgagggtctcaaccgcgtcacaagtcag
caagaggacattgctctgcaaggcgaacatcaagcattgcattccctacaaatccttaac
actagcattgtggaaggaatatctttcgtgcaaatgttcttcgaggaacgagttgatgat
atatgggctgcattggatgatacagcgagaaaacagcttcgagaactaacattcgagcta
ctcttctccactgataatggaaaaaatttggcaaagttgctggtgaaggagatcgtaaac
cgcaacatcgctcaagggtcaaatgttgacacggtcgcggaagctcttagaagacgctgt
ggcactttctgtagtcctgacgatgtcattattttcagggctcaggagcaattgcaacga
gcaaccagtgtcggcccttcgactgatcacgggagagcactcctcaacgagagtgttcga
ttgtttcaggaggtcgcgggtgttctatcccatgacaatttgtatagcgcttgctcgcaa
tttgccgccaacaaattctatgctggtgccatcagcctggcgttacttgttgcccacgaa
tccgatcgtggaaacaaagctttgtcgtggcttaatgatggcagacctgccgacgatcct
cgagcaagcttcttccattttcgcaaggattgttacgatattgtgaaggaaatcctgact
gctgtcgacaacgacactgggaacgcaccagaaatggtcgatggtagacaatccactcca
gctagaatgcgcgaagaagcgcatcaagtggttgatgactcagatgatgaggtcttccaa
tatgatctatttgattggtaccttgaacagggctggatggatagaatcattgccactgat
tctcccttcatcgtcaaatatcttgagcggactgctagcgaaagtatggagaattccgat
ttactgtggagatactacgttcatcgagaggactactctgccgctgccggtgtacaactt
actttggctaagagtgaacttccaatcaccttgcaaagaagaatcgaatacttgagcaga
gccaaagcaaacgctcaaacacaagggggtgcagttcatagacaagcacgacaaattatg
ttacatgaggctggcgagttacttgacgttgctaatattcaacatgaattattgcaacgt
ttgagagccgatactaggattcctcaagcacgaaaagataatgtagtggcagacctggat
ggtgccattcaaccactctctgtccttttcaatgaatacgctgaccaaggccaatactac
gacatctgtcttcagatttttgctgcagccaatcaccacaatcaggctgatatcaagact
atgtgggaacaacttctacaatccatacaagctcgtgtagaggaagacccacaggcacaa
aacgaacgcccatatgaagctattgtcaacattattcgggagatgtcgcaaaagctctct
ggatacgagattgtcttctctccaagtatcctcattcccctcgtcgaaacatacgcagct
gaacatgaacacccaggtcccttgaactgggttccagatttgttcctcagcgtgtcgttc
gatcctgacacaatcatcaatattttggaagggatgttctacaatgaagtcaatccgttc
gtggggcccaataggatagttcttgcaaatcacattgtttatgttgcggaacaatggtat
gaggactgtctgagacataacaaaagggtttttggaggggaggtgcagaaagacgtgatt
ggtcaacttttggcagatttgagtgccgctgcatatagggatgatccagtgggaagacag
aggatcatggagttgagaaggaggattgggttgggaggattgcgatga
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