KEGG   Sclerotinia sclerotiorum: SS1G_14124
Entry
SS1G_14124        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03018  RNA degradation
ssl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SS1G_14124
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SS1G_14124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssl03019]
    SS1G_14124
   03041 Spliceosome [BR:ssl03041]
    SS1G_14124
Messenger RNA biogenesis [BR:ssl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SS1G_14124
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SS1G_14124
Spliceosome [BR:ssl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SS1G_14124
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 5480988
NCBI-ProteinID: XP_001584841
UniProt: A7F943 A0A1D9QAY7
LinkDB
Position
Unknown
AA seq 138 aa
MSERGQHRGGGRGAGRGHGEHRGGRGGGRGGHGGERGGHGGGNFEKPKKENILDLGKYMD
KQVTVKFNGGRHVKGTLKGYDALMNLVLDDVEEKLTDDEGNEAWRALGLVVARGTLLIGI
SPVDGSEEIANPFVQQEE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctgaaaggggtcaacacagaggtggcggtcgtggagctggtagaggtcatggtgaa
cacagaggtggcaggggaggtggtagaggaggtcatggtggggagaggggtggacatggc
gggggaaatttcgagaaaccaaagaaggaaaatatcttggatttgggaaagtacatggat
aagcaggtcacagttaagttcaatggtggcagacatgtgaaagggactttgaagggctat
gatgccctgatgaatctggttttggatgatgtggaggaaaagttgactgatgatgaagga
aatgaagcatggagagcattgggtttagtggttgcaagaggaaccttactcattggaata
agcccagtcgatggcagcgaagaaatagcgaatcctttcgtacaacaagaagaatga

DBGET integrated database retrieval system