Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K12626 | U6 snRNA-associated Sm-like protein LSm7 |
|
Organism |
ssl Sclerotinia sclerotiorum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ssl00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_14124
09123 Folding, sorting and degradation
03018 RNA degradation
SS1G_14124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ssl03019]
SS1G_14124
03041 Spliceosome [BR:ssl03041]
SS1G_14124
Messenger RNA biogenesis [BR:ssl03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SS1G_14124
mRNA degradation factors
5'-3' decay
Lsm complex
SS1G_14124
Spliceosome [BR:ssl03041]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
SS1G_14124
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
138 aa
MSERGQHRGGGRGAGRGHGEHRGGRGGGRGGHGGERGGHGGGNFEKPKKENILDLGKYMD
KQVTVKFNGGRHVKGTLKGYDALMNLVLDDVEEKLTDDEGNEAWRALGLVVARGTLLIGI
SPVDGSEEIANPFVQQEE |
NT seq |
417 nt +upstreamnt +downstreamnt
atgtctgaaaggggtcaacacagaggtggcggtcgtggagctggtagaggtcatggtgaa
cacagaggtggcaggggaggtggtagaggaggtcatggtggggagaggggtggacatggc
gggggaaatttcgagaaaccaaagaaggaaaatatcttggatttgggaaagtacatggat
aagcaggtcacagttaagttcaatggtggcagacatgtgaaagggactttgaagggctat
gatgccctgatgaatctggttttggatgatgtggaggaaaagttgactgatgatgaagga
aatgaagcatggagagcattgggtttagtggttgcaagaggaaccttactcattggaata
agcccagtcgatggcagcgaagaaatagcgaatcctttcgtacaacaagaagaatga |